Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8504 343 1e-89 seq8412 167 2e-36 seq2002 132 5e-26 seq6779 84.2 2e-11 >seq8504 Length=8995 Score = 343 bits (380), Expect = 1e-89 Identities = 1187/1828 (65%), Gaps = 44/1828 (2%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || |||||||| |||| |||||||||||| ||||| | ||| ||| |||| Sbjct 3097 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 3038 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | | || | |||||||| || | || | |||||| Sbjct 3037 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 2978 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 ||||| || || ||| || || |||||||| | || |||||| || || || Sbjct 2977 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 2919 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAAT-GCCGTCAATCGCCTGAATCG 144977 ||| | || ||||||| ||| | | ||| || |||| | ||| || |||| Sbjct 2918 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCG-CTATCTTTTGGATCG 2860 Query 144978 ACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCA 145037 | || |||| | | || ||||| ||| ||| |||| | ||| ||| Sbjct 2859 ATCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCA 2800 Query 145038 AGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAAT 145097 | || | | | | || || || ||||| |||||||| | || ||| || | | Sbjct 2799 AATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGT 2740 Query 145098 ACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTG 145157 | ||||| |||||| | || || || || || || ||||| || ||||| || || | | Sbjct 2739 AAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAG 2680 Query 145158 CGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCT 145217 | || ||||| |||| || | |||||||| | ||||||||| ||| | ||||| Sbjct 2679 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCT 2620 Query 145218 TTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAA 145277 | | | |||| | ||| || ||||| | || |||||| |||||||||| || Sbjct 2619 TCAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAA 2560 Query 145278 TGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTGGCGA 145334 |||||| ||| | |||||||| | | | ||| || | | || ||| | Sbjct 2559 TGCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGC---GGCCA 2503 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 |||| || ||||| ||||| |||||| | || || || ||| |||||| || ||| Sbjct 2502 GCTCACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCT 2443 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 || || ||||| |||||||| ||||| ||| | || |||||||| | |||| Sbjct 2442 TTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCT 2383 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGAT 145509 | | || | |||||| || | || ||| ||| || | |||| || | || Sbjct 2382 GCACGCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTC--CGGCACG-- 2327 Query 145510 AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 ||||| ||| || || ||||| |||| || ||| ||| ||| | | | Sbjct 2326 -GGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTC 2268 Query 145570 CCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGAT 145629 | || |||| |||||||| || | | ||| ||| | | || | |||||| Sbjct 2267 CTTCAGCTTTGCAAAGTCATAC---GTTTTGTCTTGCTTTACAAACATGTTCAAGGCGAT 2211 Query 145630 CGACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGC 145688 ||| |||| ||| || || || ||| || || || ||| | || ||||| | || Sbjct 2210 CGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGA-GTACTCCACAATCTCAGTGC 2152 Query 145689 ACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGT 145748 ||| ||| |||||||||||| || | ||| ||||| |||||||| | ||||| || | Sbjct 2151 ACAGGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCAT 2092 Query 145749 CCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTG 145806 ||||||| |||||||||||| |||| || |||||||||| || | ||| |||| Sbjct 2091 CCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAAC--CA 2034 Query 145807 CAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAG 145866 || |||||||| ||||||| || |||| ||||||| ||||| | |||| || Sbjct 2033 CAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAG 1974 Query 145867 CTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAG 145926 || ||| ||| | || || || || || |||||||| | || || |||||||| Sbjct 1973 CTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAG 1914 Query 145927 CGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 ||| | |||| || | || |||| ||| |||| || || | ||| || ||||| Sbjct 1913 GCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTA 1854 Query 145987 CATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT 146046 | || ||| || || | ||||| || ||||| ||||| || || | ||| Sbjct 1853 AAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAG-AAACT 1795 Query 146047 -ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGC 146102 | || || | |||||||| |||| ||||| ||||| ||||| || |||| Sbjct 1794 CGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGC 1735 Query 146103 CACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGC 146162 ||||||| || |||| ||| || | ||||| ||||||||| ||| ||| | | ||| Sbjct 1734 CACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGT 1675 Query 146163 TGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCA 146222 | | | ||||||||| | || || || | ||| | || || || |||| Sbjct 1674 TCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCA 1615 Query 146223 CGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGC 146282 |||| || ||| | | || || || || || | ||||| |||||||||| Sbjct 1614 GTCCGATGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGC 1555 Query 146283 CGTCAATGCTATCGCTTCG--AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||||| ||||| ||| | ||| ||||| || | | ||| | | | Sbjct 1554 CCTCAATGCTAT--CTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTG 1497 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCC 146399 ||| |||| | |||| || || ||||| || || | |||| || || Sbjct 1496 CGTAGCCGCAGCAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGG-ACAGCAGAT 1438 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 || || ||||| || | | ||||| |||||||| ||||| | || |||||||| | Sbjct 1437 TGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCA 1378 Query 146460 GCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAA--ATAGCCGTTCTC 146517 ||||||| ||||| ||||| | | || | ||||| | ||| || ||| || Sbjct 1377 GCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGT--TC 1320 Query 146518 CAGGGTTTTGTATCCGAAAAATTTGTAC 146545 || |||||| | |||||| | |||||| Sbjct 1319 CAAGGTTTTAAAGCCGAAATAGTTGTAC 1292 >seq8412 Length=7683 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||||| | ||| | |||||||||||| || |||||||| ||| | Sbjct 4012 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3953 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 3952 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 3893 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 3892 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 3833 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 3832 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3786 >seq2002 Length=20453 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | ||| | |||||| ||||| ||||||||||| ||| Sbjct 18678 CCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAG 18619 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || || Sbjct 18618 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 18559 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | ||| | || || | | ||||| Sbjct 18558 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 18499 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || ||||| ||||||||||||||| Sbjct 18498 TCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 18451 >seq6779 Length=15061 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 46085 TGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGA 46144 ||||||||||| | ||| | ||||||||| |||| |||||| |||| | || | Sbjct 2994 TGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCA 3053 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 || | |||||| | ||||| || || || ||||| |||| || || || | Sbjct 3054 ACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCT 3113 Query 46205 TTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 | ||||| ||||| | | || | ||| | ||||| || || || || |||| Sbjct 3114 TCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACG 3173 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||||| ||||||||||| || ||||| |||||||| || || Sbjct 3174 AGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGCCTGCCT 3219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471893445663360