Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8504 363 2e-95 >seq8504 Length=8995 Score = 363 bits (402), Expect = 2e-95 Identities = 1200/1852 (65%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || || ||||| ||||||||||| || ||||| | || | |||| ||||| ||| Sbjct 3097 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 3038 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 3037 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 2978 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 |||||||| || || || | ||||| |||||||| || ||| || | || ||| Sbjct 2977 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 2918 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGAT 62107 || | ||||| || | |||| | | || | | | | ||| | || || ||| Sbjct 2917 CATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGAT 2858 Query 62108 CCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62167 ||| | | || ||| ||||| || || || ||| | | | ||| ||| Sbjct 2857 CCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAA 2798 Query 62168 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 62227 | || ||||| | || || || || || || || |||| || | || | ||||| Sbjct 2797 TCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAA 2738 Query 62228 ATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 62287 | || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 2737 ACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCC 2678 Query 62288 GTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT 62347 |||||||| || |||| || | ||| | || |||| | ||| || || || Sbjct 2677 GTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTC 2618 Query 62348 AGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATA 62407 | |||| ||||| ||||||| |||| | || ||||| Sbjct 2617 AACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATG 2558 Query 62408 CCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 62466 || || || | | | ||| | || || ||||| || || || | || || || Sbjct 2557 CCCTTGCTCACCGGGCTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC 2499 Query 62467 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 62526 ||| ||||| || | ||| ||||| || ||||||||||| || | || |||||| | ||| Sbjct 2498 ACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 2439 Query 62527 CGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 62586 || || ||| || | ||||| | || || ||||| || || | || || || Sbjct 2438 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 2379 Query 62587 ACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATA 62646 || || ||||| ||||| || | | |||| ||| | ||| || || | ||||| || Sbjct 2378 GCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 2319 Query 62647 ATTAATATCTATAATTTTATTGAGATTTCT-GACAATTACTTTGACCACATCCTTCAGTT 62705 ||| | ||| || ||||| || ||||| | | || | ||| | | || |||||||| | Sbjct 2318 ATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGCT 2260 Query 62706 TGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGA 62761 | ||| ||| | | | | || |||||||||||||||| || | || |||||| Sbjct 2259 TTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCCAGA 2201 Query 62762 TTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTAC 62819 || || || |||||||||| | || || || | | ||||||||||| || || Sbjct 2200 TTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAGGTTGG 2143 Query 62820 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 62879 ||| |||||||| || | ||| || || ||||| || || || |||||||| || | Sbjct 2142 AACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACA 2083 Query 62880 GAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 62939 | ||| | || || ||||| | ||| ||||| || ||||| ||| | | | | Sbjct 2082 GCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCG 2023 Query 62940 CCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACT 62999 |||| | | | | ||| | ||||| || |||| ||||||| Sbjct 2022 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACT 1963 Query 63000 CGTCTCCCCAAACATTGTCC---AGTCCAGGACATTCATCCGGACACATCAACGACCACT 63056 | || ||||| ||||| || || ||||| || | ||| ||||||| |||| Sbjct 1962 CTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACA 1906 Query 63057 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63116 | ||| ||| ||| || | ||| || || || || ||||| || || |||| | || Sbjct 1905 TTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-ACAT 1848 Query 63117 CTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174 || || | | ||||| || || || || || || |||||||| ||| | | || Sbjct 1847 GTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATAT 1788 Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234 ||| ||||||||| || | || ||||| | |||| ||||| ||||| || ||||| Sbjct 1787 ATCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTG 1728 Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294 ||| | ||| | || || || || || || | || ||| || | | ||| || || | Sbjct 1727 ATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAAT 1668 Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTA 63353 || || || || ||||| || |||| | || || ||| | | | | || || | Sbjct 1667 CCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGA 1609 Query 63354 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 63413 | || || ||| ||| || |||| || || | || | ||| || ||||||||||| | Sbjct 1608 TGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAA 1549 Query 63414 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 63473 | ||||| || |||| | | || || ||| || | ||| |||| || ||| Sbjct 1548 TGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCG 1489 Query 63474 CATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 63533 || ||| | ||| || || ||||| || || | || || || |||||||| |||| Sbjct 1488 CAGCAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCT 1429 Query 63534 CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 63593 | || |||| || || ||| ||| || || | || || ||||| | |||||||| Sbjct 1428 CGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCT 1369 Query 63594 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63653 | || | || ||||| || || || |||| |||||| ||| |||||| ||||||| Sbjct 1368 GGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAA 1309 Query 63654 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | || ||||||||||| ||||| || ||||||||||| ||||||| || Sbjct 1308 AGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633471778228400