Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq4286 87.8 4e-14 >seq4286 Length=20918 Score = 87.8 bits (96), Expect = 4e-14 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || ||||| |||||||| || ||| || | || | ||| || || ||| | Sbjct 18170 TGTACCTTCCACAAGTACGGTCCGTCTGGCAGTGTGCAGAAGTTCGACGGTCTGTGCGTG 18229 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 || ||| ||| | || ||||||||||||||| | ||||| |||||||||||| | || Sbjct 18230 CTGCCGCTCAACATCGTGAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCCTG 18289 Query 3487 CTAGCCATCATCAGCGGTATCGTTGTTCTGTACCGCATTGC 3527 || ||||| | | || ||| | |||||||| |||| Sbjct 18290 CTCACCATCCTGACTGGCATCTCGCTGATGTACCGCTTTGC 18330 Score = 80.6 bits (88), Expect = 7e-12 Identities = 96/128 (75%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| | | ||||| | ||| | | ||||||||| |||||||| || Sbjct 17481 CCGTGAAGGGTCTGCTGAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 17539 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| | ||||||||||| || |||||||| || ||||||| || ||||||||| Sbjct 17540 CACTACAAAGCGACCGTGATCATACTGATCGCGTTCTCGCTGCTGGTCACCTCGCGGCAG 17599 Query 2794 TACTTCGG 2801 ||| |||| Sbjct 17600 TACATCGG 17607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477238741500