Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq4818 104 2e-17 seq8412 93.3 3e-14 seq2002 87.8 1e-12 >seq4818 Length=14046 Score = 104 bits (114), Expect = 2e-17 Identities = 194/279 (70%), Gaps = 7/279 (3%) Strand=Plus/Minus Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890 ||||||| ||||||| |||| || | ||| | ||| ||||| |||||||| | Sbjct 10244 ACGATCT---GTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGCACGGCT 10188 Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTC-AGACCGCG 37949 |||||||||| ||| ||| || || |||| ||| | || | || | || ||| Sbjct 10187 TCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGAC-GAAAACGCCCGAGGAAGCG 10129 Query 37950 CTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGT 38009 || | || || ||||| || ||| ||||| |||| ||||| ||||| ||||| Sbjct 10128 CTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGAACGGG 10069 Query 38010 TACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCGCGAGATTCC 38068 |||||||| || ||||||| || |||||| | |||||| | |||| ||| Sbjct 10068 TACGTCGGTTGCATGTGGTCGATC-GCGGGCATCCACGATCAGGGCTGGAAGGAGCGCGA 10010 Query 38069 CATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 || | ||||| ||||||||||||||||| ||||||| Sbjct 10009 AATCTTTGGCAAAATTCGGTACATGAACTATGACGGATG 9971 >seq8412 Length=7683 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||||||||||||||| || ||||||||| |||||||| || | Sbjct 4013 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3954 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||||||||| || ||||| ||||||||||| ||| Sbjct 3953 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 3894 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 3893 GATTCCCTCCTTGTCC 3878 >seq2002 Length=20453 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968 || ||||||||||||||||| || ||||||||||||||||| || | | | || || Sbjct 18669 AGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTG-CG 18611 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || |||| ||||||||||| || ||||| ||||||||||| || | || || Sbjct 18610 ACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTC 18551 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCG 34087 |||||| || ||| ||| | ||| | | || | || ||| || | | Sbjct 18550 CTTGTCCTGGATCTTTGCCTTCA-CATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTG 18492 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131 | || || || ||||| ||||||||||| || || ||||| ||| Sbjct 18491 TGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTTT 18448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396964507863658