Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq16614 93.3 5e-14 seq12380 91.5 2e-13 seq7351 91.5 2e-13 seq12187 87.8 2e-12 seq11696 87.8 2e-12 seq1382 87.8 2e-12 seq12843 86.0 7e-12 seq10964 86.0 7e-12 seq9422 86.0 7e-12 seq7842 86.0 7e-12 seq3788 86.0 7e-12 seq3068 86.0 7e-12 seq1115 84.2 2e-11 >seq16614 Length=9217 Score = 93.3 bits (102), Expect = 5e-14 Identities = 85/104 (82%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 56980 AACAAATT-AACG-TTTATGAAAAAT---TTTCTCCTCGGCAAGAAATCGAACCCTGGTC 57034 |||||||| ||| |||| | |||| ||||||| || | | |||||||||| |||| Sbjct 348 AACAAATTGAACAATTTAAAACAAATAACTTTCTCCCCGACGGGGAATCGAACCCCGGTC 289 Query 57035 TCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||||||||||| ||||| |||||||||||| |||||| Sbjct 288 TCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAGGA 245 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/83 (84%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 57000 AAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||| |||||||| | | | |||||||||| ||||||||||||||||||||| ||| Sbjct 8923 AAATATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 8982 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||| ||||||| Sbjct 8983 CTGACCACTATACTATCGAGGAT 9005 >seq12380 Length=7422 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||| | |||| || | | |||||||||| ||||||||||||||||||||| ||||| Sbjct 1770 AAATATCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 1711 Query 57060 ACCACTATACTACCGAGGAT 57079 |||||||||||| ||||||| Sbjct 1710 ACCACTATACTATCGAGGAT 1691 >seq7351 Length=8765 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 56998 AAAAAT-TTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053 |||||| ||||||||| | | | |||||||||| ||||||||||||||||||||| Sbjct 402 AAAAATATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 343 Query 57054 ATACTCACCACTATACTACCGAGGAT 57079 ||||| |||||||||||| ||||||| Sbjct 342 ATACTGACCACTATACTATCGAGGAT 317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 |||| ||||||||| | | | |||||||||| ||||||||||||||||||||| | Sbjct 92 AAAACATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 151 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||| |||||||||||| |||||| Sbjct 152 TACTGACCACTATACTATCGAGGA 175 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 842 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 783 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 782 TACTATCGAGGA 771 >seq12187 Length=4761 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 || ||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 3267 TTCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 3208 Query 57063 ACTATACTACCGAGGA 57078 ||||||||| |||||| Sbjct 3207 ACTATACTATCGAGGA 3192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4201 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 4142 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 4141 TACTATCGAGGAT 4129 Score = 86.0 bits (94), Expect = 7e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2352 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2293 Query 57067 TACTACCGAGG-ATTGA 57082 ||||| ||||| ||||| Sbjct 2292 TACTATCGAGGAATTGA 2276 >seq11696 Length=4992 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 |||| ||||||||| | | | |||||||||| ||||||||||||||||||||| | Sbjct 4809 AAAACATTTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 4868 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||| |||||||||||| |||||| Sbjct 4869 TACTGACCACTATACTATCGAGGA 4892 >seq1382 Length=28016 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 17494 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 17435 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 17434 ATACTATCGAGGA 17422 >seq12843 Length=5650 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 57002 ATTTTC--TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||||| ||| || | | |||||||||| ||||||||||||||||||||| ||||| Sbjct 4958 ATTTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 4899 Query 57060 ACCACTATACTACCGAGGA 57078 |||||||||||| |||||| Sbjct 4898 ACCACTATACTATCGAGGA 4880 >seq10964 Length=5502 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 5 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 64 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 65 TACTATCGAGGA 76 >seq9422 Length=6755 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1689 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1748 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1749 TACTATCGAGGA 1760 >seq7842 Length=9580 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 8943 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9002 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 9003 TACTATCGAGGA 9014 >seq3788 Length=14504 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 57002 ATTTTC--TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||||| ||| || | | |||||||||| ||||||||||||||||||||| ||||| Sbjct 300 ATTTTCCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 241 Query 57060 ACCACTATACTACCGAGGA 57078 |||||||||||| |||||| Sbjct 240 ACCACTATACTATCGAGGA 222 >seq3068 Length=16410 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 342 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 283 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 282 CTATACTATCGAGGA 268 >seq1115 Length=29990 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||| Sbjct 15833 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAGGA 15775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543075441853360