Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2002 132 5e-26 seq8412 111 2e-19 seq8504 105 7e-18 >seq2002 Length=20453 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||||| ||||||| |||||||| || ||||||||||| || | Sbjct 18679 ACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGA 18620 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || |||||||||||||| | || || |||||||| || || || Sbjct 18619 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 18560 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || ||| ||| ||| ||| | || || | || || Sbjct 18559 AATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 18500 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||||||||| | ||||| |||||||| ||||| || Sbjct 18499 CTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 18449 >seq8412 Length=7683 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||||| ||||||| ||||| || || || |||||||| || | Sbjct 4013 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3954 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||||||||| | || || |||||||| || || || Sbjct 3953 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 3894 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| ||| ||| | ||||| || || || Sbjct 3893 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 3834 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || || | ||||| ||||| || ||||| || Sbjct 3833 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 3783 >seq8504 Length=8995 Score = 105 bits (116), Expect = 7e-18 Identities = 282/431 (65%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| |||||||||||||||| |||||||| | ||||| || || | || || ||||| Sbjct 2728 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 2669 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 |||| || || || || || | ||||| || || || || || || ||| Sbjct 2668 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 2609 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 || ||||||| | || |||| | ||||||||| ||||| |||| || ||| ||| Sbjct 2608 CAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTC 2549 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310 |||| ||| | || | |||||| || | | |||| || || || ||| Sbjct 2548 ACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCT 2489 Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370 || | || | ||||| | ||||||| ||||| | |||| | ||| || | || Sbjct 2488 TCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCG 2429 Query 154371 CTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCA 154430 ||||||||||| | | || | || |||||||| | || || | ||| | || Sbjct 2428 CTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCG 2369 Query 154431 ACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATATCG 154490 | |||||||| | ||| || || || || || ||||| ||||||| ||| Sbjct 2368 ATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCA 2309 Query 154491 ATAATTTTATT 154501 || ||||| || Sbjct 2308 ATGATTTTGTT 2298 Score = 93.3 bits (102), Expect = 4e-14 Identities = 575/909 (63%), Gaps = 25/909 (3%) Strand=Plus/Minus Query 154625 GTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATT 154684 ||| | |||||| || | ||||| || ||| |||||||| | || | ||| || Sbjct 2171 GTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT 2112 Query 154685 CGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGT 154744 ||| ||||| || || ||||||| |||||||| ||| |||||||| || | Sbjct 2111 ACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGA 2052 Query 154745 TTCAATAATTGTGCGAAACAGACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCG 154802 ||| || || | | || || | || |||||| || || | |||| ||| || Sbjct 2051 TTCGATGATCG--CAAACCACAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTCT 1994 Query 154803 CTCTCATATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGA 154862 |||| || |||||| || || |||||| | | |||||| | |||||| Sbjct 1993 TTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGA 1934 Query 154863 CAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAA 154922 || || || ||||||| |||||||||||| | || || | ||| |||| Sbjct 1933 CAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGG 1874 Query 154923 TCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTT 154982 ||||| | ||| | ||||| |||| || || || || || ||| ||||| Sbjct 1873 TCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTT 1814 Query 154983 CGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATC 155042 ||| | || | ||| || |||| ||| | ||||||||||| | ||| | ||| | Sbjct 1813 TTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAAT 1754 Query 155043 GCGCCTTTGCG---TTTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGC 155099 || || || || || || ||||| |||| || | ||| ||||| |||||| Sbjct 1753 GCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGC 1694 Query 155100 AACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC----ACGTATCGCGCTGCCGCG 155155 | || || ||| ||| | | | ||||| || || | ||| || | || Sbjct 1693 AGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTA-CG---TTCCCTT 1638 Query 155156 AGCACGCGCTTTA-TGAACATTAACGCCCAAACCTCCGCCGTATTTAGATATTTGCGCAC 155214 || || | | | || || || | || | || ||| | |||| || ||| | |||| Sbjct 1637 CGCGCG-GATACAGTGCACGTTCAGTCCGATGCCACCGGCCGATTTCGAAATTAGAGCAC 1579 Query 155215 AGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAAC 155274 | | | || || ||||| || || | ||||| ||||| || ||||||| ||| | Sbjct 1578 ACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGC 1519 Query 155275 ACGAAGATAATTGAGGTTG-AGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTA 155333 | || || | || || | | | |||| || ||||| | || || ||||| || Sbjct 1518 AGGACGAAAGCTGGGGACGCTGCGTAGCC-GCAGCAAACATGGTTGGCGAGGCGTGGGTG 1460 Query 155334 AACATTTTGTTGGCGGTTA--AG-TTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCG 155390 || | | | ||| | || ||||| || ||||| || || || ||||| || Sbjct 1459 AA-GTAACGCT--CGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCA 1403 Query 155391 TGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTG 155450 || || || || || ||||||||||||||||| || |||||| | | || ||| Sbjct 1402 TGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTG 1343 Query 155451 ATGCGCTTTAAGTACCCATTTTCCAAAGTTTTATACGCAAAATACTTGTATTCGTAGTCT 155510 || | ||||| |||||| |||||| | | ||||| ||||| || |||| Sbjct 1342 ATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCG 1283 Query 155511 CGTTTGTAA 155519 || | |||| Sbjct 1282 CGATCGTAA 1274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499518458566760