Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq8129 104 2e-17 seq208 93.3 3e-14 seq15127 82.4 6e-11 >seq8129 Length=22160 Score = 104 bits (114), Expect = 2e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 21289 GCCGGGTTCGGGGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGGTCGTACAAGGCG 21230 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || ||||| || ||| Sbjct 21229 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTCGATCGCCGGCCAGAATACGATC 21170 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || |||| | || ||| Sbjct 21169 TACGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAAACGAACGGTGATCCA 21110 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||||| ||| |||| ||| || | ||||||| || ||||| ||| || |||| | Sbjct 21109 CACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTGCGCAAGCAT 21050 Query 108580 CCCGA 108584 || || Sbjct 21049 CCGGA 21045 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| || |||||||||| ||| ||| | ||||| ||| || |||||||| Sbjct 11738 GCCGGGTTCGGCGTTACGGCCGGCGCCCACCGGCTCTGGACGCACCGGGCGTACAAGGCG 11679 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| || || | || ||||||| | | Sbjct 11678 AAGCTGCCGCTGCGCATCATCCTGATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 11619 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| || || | | |||||||||||||| || ||| |||||||| Sbjct 11618 TTCGACTGGGTGCGGGACCATCGCATCCACCACAAGTACTCGGAGACGGATGCCGACCCG 11559 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569 |||||| | ||| |||| |||| | | | ||||| || ||||| |||| Sbjct 11558 CACAACTCGAACCGGGGCTTCTTCTACGCCCACGTCGGCTGGCTGCTGAT 11509 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 ||||| | ||||| ||||||||||||||||| ||||||||||| | ||||||||||| | Sbjct 17922 TGGCTATGGGCGAAGGATGGCACAACTACCATCACGTGTTCCCGTGGGACTACAAGGCAG 17863 Query 108941 CCGAGTTGGGGAACGACT 108958 ||||| |||| ||| ||| Sbjct 17862 CCGAGCTGGGCAACTACT 17845 >seq208 Length=74476 Score = 93.3 bits (102), Expect = 3e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || ||||||||||||| || ||| || || || || || | || || ||||||| | Sbjct 3734 CCATCGCGACCGGCCCGGCCCGACTCCTGGTAGTAGCCTTCGATCGACTTCGGCATACAG 3675 Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298 | || | ||| |||||||||| || || ||||||||||| |||||||| ||||||| | Sbjct 3674 TAGTGCAGCACGTACCGCACGTCCGGCTTGTCGATGCCCATGCCGAACGCGATCGTCGCA 3615 Query 118299 CATATCACTCGGGTCTCGTTCGCC-ATCCA 118327 || | ||| | || || ||||| ||||| Sbjct 3614 CACACCACCTTGATC-CGGTCGCCGATCCA 3586 >seq15127 Length=3019 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| || |||||||||||||| ||||||||||| | || Sbjct 1988 GGTGGCTTCGTTCGCGTTTGGCGAAGGTTGGCACAACTACCATCACGTGTTCCCGTGGGA 1929 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 1928 CTACAAGACGGCCGAGCTGGGCAACTAC 1901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381678677375976