Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8504 446 2e-120 seq6779 118 1e-21 seq2002 87.8 2e-12 >seq8504 Length=8995 Score = 446 bits (494), Expect = 2e-120 Identities = 1005/1500 (67%), Gaps = 20/1500 (1%) Strand=Plus/Minus Query 153027 TGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAA 153086 ||||| ||||| || |||||||||| || ||| || || || || || ||| | Sbjct 2782 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTAC 2723 Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 || || || ||||| || ||||| || ||||| ||||||| || |||||||| ||| Sbjct 2722 GGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCC 2663 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | || || ||||| || | ||||||| || | ||||||||| | ||| | | Sbjct 2662 AACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTC 2603 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 ||||| ||| |||| | ||||||||| |||||||| | | || || | || Sbjct 2602 CACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGG 2543 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||||| | |||| ||| || || || |||||| || ||||| || || || Sbjct 2542 CTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGT 2483 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCG 153386 ||||| ||||| ||||||||| ||||| | ||| || || |||||||| ||| Sbjct 2482 GCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCG 2423 Query 153387 TACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGT 153446 ||||| ||||| ||| | || || ||||||| ||||| | |||| |||||| ||| Sbjct 2422 TACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGGT 2363 Query 153447 CGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATT 153506 | || | ||| |||| | || || | |||||||| |||| ||| || ||| Sbjct 2362 CTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATT 2303 Query 153507 TTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTC 153566 ||||| || |||||| ||| |||| | |||| || || | || ||||| || Sbjct 2302 TTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT- 2244 Query 153567 ATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTC 153626 || ||| ||| | |||| ||| || || |||||||| || || || | Sbjct 2243 --TTTGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACC 2186 Query 153627 TCTTCGG-CGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCC 153685 || || || || ||||| ||| ||||| | ||| |||||| ||||| ||| ||| Sbjct 2185 TCATCCTTCGACGA-GTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTGCC 2127 Query 153686 CAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCC 153745 | ||| ||||| || ||||| |||||||| || || ||| | |||||||||||| |||| Sbjct 2126 GATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCC 2067 Query 153746 GGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTG 153802 ||| || || |||| ||||| ||| ||||| ||| |||||||| |||| || | Sbjct 2066 GGTTTCCACCTGCGATTCGATGATCGCAAACC---ACAGATCCTGCGCCTTCACCTGCCG 2010 Query 153803 CCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCA 153862 | | |||| ||||| ||||||| | | |||||| ||| ||||| ||||| || Sbjct 2009 CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGT 1950 Query 153863 GTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGAC 153922 ||| | || |||||||| | ||||| |||||||| |||||| |||| || | || Sbjct 1949 GTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCAC 1890 Query 153923 GCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATC 153982 || |||||||||| ||||| | |||||| ||||| | | ||| || || | || Sbjct 1889 ACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTC 1830 Query 153983 CTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACGCTATAGATGTCGGCGTGCCAGGGTT 154041 |||| ||| |||| ||||||| ||| || | | | || ||| | ||||| || | Sbjct 1829 CTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGA-ATATATCGCCATGCCACGGCT 1771 Query 154042 CAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCA 154098 ||| |||| ||| | || || ||| || || ||||||||||||| || || Sbjct 1770 CAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCG 1711 Query 154099 TATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT--CGAATT 154156 |||||||| ||||||||| ||| || |||| ||| | | | ||||| || || | Sbjct 1710 TATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGA-- 1653 Query 154157 GATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTT 154216 ||| | | || ||||| | |||||||| | || ||||| ||| | | || Sbjct 1652 GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGATTT 1593 Query 154217 TGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGAC 154276 || || ||| || | |||||| ||||||||| || |||||||| ||| | Sbjct 1592 CGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACAT 1533 Query 154277 GCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGG 154336 | | || ||| || || | | || ||| |||| |||| | ||| | ||| || Sbjct 1532 GGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACATGGTTGG 1473 Query 154337 ACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGAT 154396 ||||| || || | | || || ||| || ||||| || | ||||| Sbjct 1472 CGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGAT 1413 Query 154397 ATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 || ||||| || ||||| | || |||||||| ||||||||||| || || ||| ||| Sbjct 1412 GTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGAT 1353 Query 154457 TCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTA 154516 | | | ||||||| | ||| ||| | |||||| | |||||||| ||||| Sbjct 1352 TTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTA 1293 >seq6779 Length=15061 Score = 118 bits (130), Expect = 1e-21 Identities = 296/441 (67%), Gaps = 8/441 (2%) Strand=Plus/Plus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | ||||| |||| ||| |||||||||| | ||||| | ||||| |||| Sbjct 2972 CTGTTCAATGCCATCGAA-ACGCTGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAA 3030 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| |||| | | |||| | | |||||| | ||||| ||||| || || Sbjct 3031 CTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGA 3090 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | || || ||| ||||| ||||| ||||| | | || | | ||| | || Sbjct 3091 GGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGAT 3150 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || || || ||| |||||| |||| |||||||||||||| |||||| ||||| Sbjct 3151 GCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTT 3210 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGA 52602 ||| ||||| | |||| | ||| | ||| | || ||| | || | || Sbjct 3211 TGCCTGCCTGATGTTCAAGTATCTGGTG-CAGAAGCCGTCGA--AGGAGCGCGTGACGGA 3267 Query 52603 GCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCG 52662 | || || || ||||| ||||| ||||||| | ||| || |||||||| | Sbjct 3268 G-ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGG 3326 Query 52663 AGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTC 52722 | |||| ||||||||| | |||| ||||||| ||||||||||| |||||| Sbjct 3327 ATATGCTTGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTT 3386 Query 52723 TGTTGGTGCAGCTCGGGCAGC 52743 || || | |||| |||| || Sbjct 3387 TGCTGCTCGAGCT-GGGCTGC 3406 >seq2002 Length=20453 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || | ||| | | | || ||||| ||||||||||||||| | ||| || Sbjct 18666 CGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCA 18607 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| |||| |||||||| || || || || || ||||| ||| Sbjct 18606 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTG 18547 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| || | | || | ||||| | | ||| ||||| | || | Sbjct 18546 TCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 18487 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || || || || ||||| || |||||||||||| Sbjct 18486 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 18451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496136913848880