Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8504 201 2e-46 seq6779 172 9e-38 >seq8504 Length=8995 Score = 201 bits (222), Expect = 2e-46 Identities = 411/608 (68%), Gaps = 2/608 (0%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||||||||||||||| ||||| || || |||||||| ||| || | | ||||||||| Sbjct 3134 CTTCGTCTTGTCCACCGTAAACTGGATTGCATTCACGGCCGGCTTGGTACGCAGATAGTA 3075 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| || || | ||| ||| ||| ||||| | || || || | ||| |||| Sbjct 3074 CATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATA 3015 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGAT 204011 ||| || || || | ||||||||| | || || || ||||| ||| ||||| |||| Sbjct 3014 GTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGAT-AAACGCGCCACGAT 2956 Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTC 204071 |||||||||| ||||| || ||| ||| |||||||| ||||| ||| ||| ||| | Sbjct 2955 CTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGC 2896 Query 204072 TGGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || || | | | | | | |||||| || |||| || || | | Sbjct 2895 GAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGT 2836 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | || |||||| |||| || ||| ||| ||| || || |||| | Sbjct 2835 TCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCA 2776 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 | ||| || || || |||||||| | | || | | ||| ||| | || |||| Sbjct 2775 CCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGA 2716 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 ||| || |||||||||| ||| || || ||| ||||| ||||| || |||| |||| Sbjct 2715 ACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCA 2656 Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCG 204371 | || ||||| | |||| || || | | ||||| || ||||| || Sbjct 2655 GCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGAT 2596 Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 | | |||| | | |||||| ||| |||| | ||||| | || || |||||||||| Sbjct 2595 CCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCT 2536 Query 204432 TGTACGTC 204439 ||||||| Sbjct 2535 CGTACGTC 2528 Score = 114 bits (126), Expect = 2e-20 Identities = 338/514 (66%), Gaps = 8/514 (2%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||| ||||| ||||||| ||| || || | || | || |||||||||| Sbjct 2168 CTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACT 2109 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 || || || || | |||||||||| |||| |||| | ||| | |||| ||| ||| Sbjct 2108 TTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTC 2049 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGAC 205060 | || ||||| || | |||| ||| ||| || || | | || | | Sbjct 2048 GATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCA--TAAAGCGACCCTCTTTC 1991 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 ||||| ||||||||| | | || || || | |||| ||||| ||||| Sbjct 1990 TCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAA 1931 Query 205121 TTTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | | || |||||||| |||||| | | ||| || ||| | || ||| |||||||| Sbjct 1930 TCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTC-CACACGCTGCATGAACAGGTC 1872 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 ||||| || ||||||||| || || || | | | || | || ||| || Sbjct 1871 CGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTT 1812 Query 205240 TTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298 |||| || || || || | || ||| | ||||||||||| | | | ||| | || Sbjct 1811 CTTCAGATCGAGA-AACTCGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAATG 1753 Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCA 205358 | || |||| |||||| |||||||| || || || | | | |||| | || |||| Sbjct 1752 CTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCA 1693 Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 ||||||||||||||||||| | |||||||||| Sbjct 1692 GCATCGGCACCAGACCGTTCGAAATCCCGTTCGT 1659 >seq6779 Length=15061 Score = 172 bits (190), Expect = 9e-38 Identities = 244/340 (72%), Gaps = 5/340 (1%) Strand=Plus/Minus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803 |||||| | || |||||||| || ||||| || | ||||| | |||||||| || || | Sbjct 3391 CAGCAAACGATCGGCCACAAACTCAATGTA-CTGCGACATCAGATCACAGTTCATGCCAA 3333 Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863 ||| || || || || | || ||| ||||||| ||| ||| |||||| ||| | Sbjct 3332 GCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGCATCGCGGA 3273 Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 |||| || || || || | | |||||| || | | | ||| |||| |||| Sbjct 3272 TGATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCA---GATACTTGAACATCAGGC 3216 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | ||||||||||||||||| || ||||| || ||||| | |||||| || | | |||| | Sbjct 3215 AGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTC 3156 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 ||||||| | |||||| || ||||| || || || || || |||||| || |||| Sbjct 3155 CCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGA 3096 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 | ||||| || || || || ||||||| || ||| ||||| Sbjct 3095 TACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAA 3056 Score = 122 bits (134), Expect = 1e-22 Identities = 173/240 (72%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 160205 ATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAA 160264 |||||| ||||||||| || |||||||||||| || || ||||| ||| |||||| Sbjct 2838 ATCAGCAGCGAGTACATCTCACTGTGCACATTTTCCATCGCAATCTGGAAGCCGTAGAAG 2779 Query 160265 TATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACC 160324 | ||| ||| | |||||||||||| |||| | || ||||||| | || || Sbjct 2778 CAGCGCGCTTCCGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATTCTCGTTCACG 2719 Query 160325 AACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTG 160384 | ||||||| || |||||||| |||| |||||| |||||||| || | ||| || | Sbjct 2718 ATACCGTCGGACGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGTGGCGTTCG-CTCGG 2660 Query 160385 TTGAGTC-TCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 || || | | ||||||| ||| ||| | || || ||||||||||||| | |||| Sbjct 2659 TT---TCAGCGTCTCCCAGTCCTTCATGTCCTTGGACAGATCAACCTCTTCCACCGTCCA 2603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794954135068240