Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6779 244 1e-59 seq2002 143 3e-29 seq8412 136 4e-27 >seq6779 Length=15061 Score = 244 bits (270), Expect = 1e-59 Identities = 311/428 (73%), Gaps = 0/428 (0%) Strand=Plus/Minus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| |||| |||| | |||||||| ||||| ||||| |||||||| || || || Sbjct 3400 CAGCTCGAGCAGCAAACGATCGGCCACAAACTCAATGTACTGCGACATCAGATCACAGTT 3341 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | || |||| | ||||||||| || | || || || |||||||| |||||| Sbjct 3340 CATGCCAAGCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGC 3281 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACAT 132890 ||| || ||| ||| | |||||| || |||| ||||||| || ||||||||| Sbjct 3280 ATCGCGGATGATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACAT 3221 Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950 || ||| ||||||||||| |||| || ||||| | || || || ||||| ||| || Sbjct 3220 CAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGT 3161 Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010 | || ||||| ||||| || || || ||||| || || |||||||| || || || Sbjct 3160 GAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAA 3101 Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070 ||||| ||||| || || ||||| ||||| | |||||||| || |||| | ||||| Sbjct 3100 GAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT 3041 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||| ||||||||| || ||||| || |||||||||| |||||||||||| Sbjct 3040 CGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCTCTTCACGCACGGCAGCGTTTCGATGGC 2981 Query 133131 GTTCAACA 133138 || |||| Sbjct 2980 ATTGAACA 2973 Score = 176 bits (194), Expect = 5e-39 Identities = 209/281 (74%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 133148 TCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGT 133207 |||||| |||| || | ||| |||||||| || ||| ||||| || ||| || | Sbjct 2867 TCTCTTTCGAGTCGCGAATGTACGTGTCGATCAGCAGCGAGTACATCTCACTGTGCACAT 2808 Query 133208 TCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAG 133267 | ||||| || || || |||||||| ||||| ||||| || |||||||| || || Sbjct 2807 TTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCTTCCGTAACCTGCACCTCCTGGC 2748 Query 133268 CGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCA 133327 ||| || || |||||||| ||||| ||||| |||||| ||||| || |||||||||| Sbjct 2747 TGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGACGCGGCAAAGAAGGCCAGCA 2688 Query 133328 CGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCGTGTCCTTG 133386 |||| |||||| ||||| ||| | |||| ||| ||||||||| | |||||||| Sbjct 2687 CGTGGGAGATGAAGTGGCGTTCGCTCGGTTTCA-GCGTCTCCCAGTCCTTCATGTCCTTG 2629 Query 133387 GACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||| || ||||| || || ||||| || || || || || Sbjct 2628 GACAGATCAACCTCTTCCACCGTCCAGAAGGAAGCTTCCGC 2588 >seq2002 Length=20453 Score = 143 bits (158), Expect = 3e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| | Sbjct 18448 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 18507 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | || | ||| |||| ||||| || || |||||| | || Sbjct 18508 TTCGGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGA 18567 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||||| Sbjct 18568 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 18627 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| || |||||| |||| || ||| |||||||||| Sbjct 18628 CAACATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCG 18666 >seq8412 Length=7683 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || |||||| || Sbjct 3783 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 3842 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 | || | | | | | || | || |||| ||||| |||||||| |||||| || Sbjct 3843 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGA 3901 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| |||||||| || | ||||| || |||||| Sbjct 3902 TCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTA 3961 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || ||| |||||||||| Sbjct 3962 CAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCG 4000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500046325055360