Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq8044 369 5e-97 seq1160 302 6e-77 seq1819 181 1e-40 seq1898 111 2e-19 seq104 96.9 4e-15 >seq8044 Length=8054 Score = 369 bits (408), Expect = 5e-97 Identities = 814/1210 (67%), Gaps = 14/1210 (1%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || ||||| || |||||||| | || | ||| || || || || Sbjct 4859 GTCTCGATACCGAGCGACAGCGGGGTCACGTCGAGCAGCAGCAGATCCTGCACC---TCC 4915 Query 7004 TTCC-CTTCAC-CCGTTAAG-ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 | | ||| | |||| || |||||||| ||||| | || ||||| ||||| ||||| Sbjct 4916 TCCGACTTGTCGCCGTGCAGGATGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCG 4975 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGA 7120 || ||||| || | || |||| || || ||||| || | ||| | || | || Sbjct 4976 TCCGGGTTGATAGACTTGTTCAACTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGC 5035 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCG 7180 | |||||||| || ||||||||||| |||| ||||| || | | ||| || || Sbjct 5036 ACCTTCGGGATGCGCGTCGATCCACCCACCAGCACGATGTCGTGGATGCTCGCCTTGTCC 5095 Query 7181 ATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCAT 7239 ||||| | ||| || || | || ||||| || ||||| | | | ||||||| ||| Sbjct 5096 ATCTTGGCGTCGCGCAGCGCCTTCTCGACCGGCTCCAT-CGTCGAGCGGAACAGGTCGGC 5154 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||| ||||| || || || || || || || || |||||||| || ||| | | Sbjct 5155 GTTCAGCTCCTCGAAGCGGGCGCGCGTGATCGAGGTGTAGAAATCGGTTCCCTCGAACAG 5214 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 |||||| || |||||| | | || | || ||| || | ||| |||||||||||||| || Sbjct 5215 CGAATCGATCTCAATGCTCGCCTGCGTCGACGACGAGAGCGTGCGCTTTGCGCGCTCGCA 5274 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | || || ||||| ||| ||| ||| | ||| ||||| || || || Sbjct 5275 CGCCGTGCGCAGTCGGCGCAGGGCGCGCTTGTTGGTGGACAGATCCTTCTTGTGCTTGCG 5334 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || || | | |||||| | || | ||||| || ||||| |||| || Sbjct 5335 CTTGAATTCCTGTGCGAAGTGGTTCACCAGACGGTTGTCGAAGTCCTCACCGCCCAGATG 5394 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||||| ||||| || ||||| || | || ||| | | ||| || Sbjct 5395 GGTGTCTCCGGCGGTCGACTTGACCTCGAAGATGCCATCGTCGATGGAAAGAATCGACAC 5454 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || || || || || || ||||| || || | | ||||| Sbjct 5455 GTCGAAGGTGCCGCCGCCGAGATCGAAGATCAGCACGTTGCGCTCACCGGCGGTCTTCTT 5514 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || |||||||||||||| || ||||| || || || || || || || || |||||| Sbjct 5515 GTCCAGACCGTACGCGATGGCGGCCGCGGTCGGCTCGTTGATGATGCGCAGCACGTTCAG 5574 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || | || || | ||||| |||||||| || || ||||| ||||| |||||||| || Sbjct 5575 TCCCGAGATGGTACCGGCATCCTTCGTCGCCTGGCGCTGCGAGTCGTTGAAGTAGGCTGG 5634 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || | ||| |||| ||| || |||| || || || | ||| || | || ||||| Sbjct 5635 CACGGTGATGACGGCGTTCGTCACCGTCTTGCCCAGGTAGGCTTCGGCCGTTTCCTTCAT 5694 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 ||||| || |||||||| | ||| || | || ||| | || || || | Sbjct 5695 CTTGGTCAGCACCATCGAGCTGACCTCCTCCGGGAAGAAGCACTTCTTCTCGCCCTTGTA 5754 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 || || | || | || || || | | | | |||| ||| ||| | || Sbjct 5755 CTCGACCGCGATTTTTGGCTTGCCCTC-GATC--GACTCCACCTCGAACGGCCAGTGCTT 5811 Query 7900 CATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 ||| ||| | |||| | | || ||||| | ||||| |||||||| || || || Sbjct 5812 CATGTCGGCCTGGATCGCGGGATCGTCGAACTTGCGGCCGATCAGACGCTTCGCGTCGAA 5871 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 | ||||| | ||||||||||| |||||||| || || || || || ||||| || Sbjct 5872 GATGGTGTTGGTCGGGTTCATGGCCACCTGGTTCTTGGCAGCATCGCCAATCAGACGCTC 5931 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 || || || || || || |||||||| || ||||| || || |||||||| || || Sbjct 5932 CGTA---TCAGTGAAGGCCACATACGATGGCGTGGTTCGGTTGCCCTGGTCGTTGGCGAT 5988 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 || || || | ||| || | || ||||| || ||| || || || | |||||| Sbjct 5989 GATCTCGACCTTGCCGTGCTGGAACACTCCGACACAGCTATAGGTCGTACCCAGATCAAT 6048 Query 8140 ACCGATTGCT 8149 ||||| |||| Sbjct 6049 ACCGACTGCT 6058 >seq1160 Length=33927 Score = 302 bits (334), Expect = 6e-77 Identities = 591/869 (68%), Gaps = 6/869 (1%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 ||||||| || || ||||| || |||||||||| || | ||| || ||||| | ||| Sbjct 18426 GTTTCGATGCCCAGCGACAGGGGCGTCACGTCCAGCAGCAGCAGATCCTGAACCGCTTCC 18485 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | |||||| | ||||||||| || || | |||||||| ||||| ||||| || Sbjct 18486 GACGTGTCACCCTGCAGGATGGCGGCCTGCACGGCGGCCCCGTACGCGACGGCCTCGTCC 18545 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| |||| ||| ||||| || || ||||| || | ||| | || | || | Sbjct 18546 GGGTTGATCGATTTGTTCAGCTCCTTGCCGTTGAAGAAGTCCTGCAGCAGCTTCTGTACC 18605 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || || |||||||||||||| | ||||| || | | | | || || ||| Sbjct 18606 TTGGGAATGCGGGTCGATCCACCGACGAGCACGATGTCGTGGATGCTGGCCTTGTCCATC 18665 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACA--GGTTCCATACATTTACGGAACAAGTCCATAC 7241 || | || || |||| ||||||| || ||||| | ||||||| |||| | Sbjct 18666 TTGGCATCGCGCAGTG--CCTTCGACACCGGCTCCATCGTGTCGCGGAACAGGTCCGAAT 18723 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| || || || | || || || || |||||||| | ||| ||||| | || Sbjct 18724 TGAGCTCCTCGAACCGGGCTCTCGTGATCGAGGTGTAGAAATCGATGCCCTCGTACAGCG 18783 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 | || || || ||| ||| || | | || || | || |||||||| ||||| || | Sbjct 18784 AGTCGATCTCGATGCTTGCCTGGGTGGACGCGGACAGTGTGCGCTTTGCCCGCTCGCAAG 18843 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 |||| || || || || || || ||| ||| | | ||| || ||||| || || || | Sbjct 18844 CCGTGCGCAATCGGCGGAGCGCGCGCTTGTTGCTCGTAATGTCCTTCTTGTGCTTGCGCT 18903 Query 7422 TAAACTCTTCAGAGAAGTGTCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| || ||||| ||| | | | || || || || || || | || Sbjct 18904 TGAACTCCTCGACAAAGTG-CGACACCATGCGGTTGTCAAAGTCCTCGCCGCCGAGATGG 18962 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || |||| || || ||||||||||| | || || | | | ||| || Sbjct 18963 GTGTCGCCGGCCGTCGACTTCACCTCAAAGATACCGTCCTCGATCGTGAGGATCGACACG 19022 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || || || || || || || || || || || |||||| ||| || | ||||| Sbjct 19023 TCGAAGGTGCCGCCGCCGAGATCGAAGATCAGCACGTTCCGCTCGCCGGCCCCCTTCTTG 19082 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || || |||||||| || || |||||||| || || || || || || || ||||| Sbjct 19083 TCCAGCCCGTACGCAATGGCGGCCGCCGTCGGCTCGTTGATGATGCGCAGCACGTTCAAC 19142 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || | | ||||| ||||| || || || ||||| ||||| ||||| ||||| Sbjct 19143 CCGGCGATCGCACCGGCATCCTTCGTGGCCTGGCGCTGCGAGTCGTTGAAGTACGCCGGC 19202 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || | ||| |||| | | |||| ||||| |||| ||| || | || ||||| Sbjct 19203 ACGGTGATGACGGCGTTGGCAATGCTCTTGCCGAGGTACGCTTCGGCCGTTTCCTTCATC 19262 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||||| || |||||||| || | ||| || Sbjct 19263 TTGGTCAGCACCATCGAGGACACCTCCTC 19291 Score = 104 bits (114), Expect = 3e-17 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||||| ||||| ||||| ||||| || |||||||| || || || || || | || Sbjct 19515 CAAAAATGGTGTTGTTGGGATTCATCGCAACCTGGTTCTTGGCAGCATCTCCAATCAAAC 19574 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 |||| || | || || || |||||||| ||||| ||||| || || || ||||||| Sbjct 19575 GTTCCGAAT---CAGTGAATGCCACGTACGACGGGGTGGTTCGGTTGCCCTGATCGTTCG 19631 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 | ||||| || || | | | || | || ||||||||||| || || || || | || Sbjct 19632 CGATAATGTCCACCTTGCCATGCTGGAACACACCGACGCACGAGTAGGTAGTGCCAAGAT 19691 Query 8136 CAATACCGATTGCTTGAGTCATT 8158 | ||||||| ||| | ||| || Sbjct 19692 CTATACCGACAGCTGGTGTCTTT 19714 >seq1819 Length=21526 Score = 181 bits (200), Expect = 1e-40 Identities = 457/694 (66%), Gaps = 18/694 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| || |||| || || || || || || || || || | || Sbjct 19839 TCGAAATCTTCGCCGCCCAGATGGGTGTCACCGTTCGTGGCCACCACCTCGAACACGCCG 19780 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || ||| || || || ||||| || ||||| || || | || ||| Sbjct 19779 TTGTCGATGGTCAGCAGCGACACGTCGAAGGTACCGCCGCCCAGATCGAACACCAGCACG 19720 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| |||| ||||| || || ||||| ||||| || ||||| || || || Sbjct 19719 TTCTTCTCGCCGTC---CTTCTTGTCCAGTCCGTAAGCGATGGCGGCCGCAGTCGGCTCG 19663 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || | ||| || || || ||| |||| || |||||||| || || Sbjct 19662 TTGATGATGCGCATCACCACCAGACCGGCGATCGTTCCCGCGTCCTTCGTCGCCTGGCGC 19603 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 |||| |||||| ||||| ||||| || || ||||| || | || || ||||| || || Sbjct 19602 TGCGCATCGTTGAAGTACGCCGGCACGGTAACGACGGCATGGGTCACCTTCTTGCCCAGG 19543 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 |||| ||| || | || ||||| ||| || ||||||| |||||||| || | ||| Sbjct 19542 TACGCTTCGGCCGTTTCCTTCATCTTGCCCAGCACCATCGCGGAAATCTCCTCCGGCGCG 19483 Query 7817 AAC----TGTTTCGTTTCACCGTTAAAATC--AACTTCAATCATGGGTTTATCCGCAGCA 7870 ||| ||| | | | || | | | | | | ||| || | | | Sbjct 19482 AACACCTTGTCGCCCTGGCCGGTCGACACCCTGATGTGCGGCTTGGAGTTCTTCTC---- 19427 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 ||| ||||| ||| | || || |||| || ||| ||||| | ||| Sbjct 19426 -----GATCACCTTGAACGGCAGCAGCTTGATGTCGTGCTGCACCGTGTGGTCGGTGAAC 19372 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 | | || || |||||||| ||||| || || ||||| | ||||| | | ||| Sbjct 19371 TCGCGGCCAATCAGACGCTTCGCATCGAACACGGTGTTCTCCGGGTTGGTCGTCAGCTGG 19312 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || ||||| ||||| || || ||| | |||| || || ||||| || || Sbjct 19311 TTCTTGGCGGCGTCTCCGATCAGGCGCTCACCGTCGGCCGTGAATGCCACGTAGGACGGC 19252 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || | || || || |||||||| ||||| ||||| ||||| |||| | | || ||| Sbjct 19251 GTGATGCGGTTACCCTGGTCGTTGGCAATGATTTCCACGCGCCCGTTCTTGTACACACCG 19192 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 ||||| || || || || || | ||| ||||||| Sbjct 19191 ACGCAGGAGTAGGTGGTGCCGAGATCGATACCGA 19158 >seq1898 Length=30912 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 ||| | | |||| || | ||||||||||| || |||||||| || || ||||| | || Sbjct 23416 GTCCTCGCTCTTGTCCATACCGTACGCGAGCGCGGCCGCCGTCGGCTCGTTAATCACGCG 23357 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 || ||||||||| ||||| ||||||| |||||||| || || || |||||||| Sbjct 23356 CAGCACGTTCAGGCCCGCAATCTGGCCCGCATCCTTCGTCGCCTGGCGCTGGGAATCGTT 23297 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 ||||| ||||| ||||| | |||||| | | |||| Sbjct 23296 GAAGTATGCCGGCACCGTAATGACCGCATTCTTGAC 23261 >seq104 Length=60934 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || |||||||| || || ||||| ||||| || || || || || || || ||| Sbjct 1473 TTCTACCAGGCATCGACGTCCGAGCTGTACGGCAAGGTGGCGGAGACGCCCCAGAACGAA 1532 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG--- 22560 || || ||||| || || || || || || | | || || || || || ||| Sbjct 1533 AAGACCCCGTTCTATCCCCGCTCGCCGTACGCGTGTGCCAAGATGTACGGGTACTGGATT 1592 Query 22561 GCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAAC 22620 | || | || ||| | ||| | |||| ||||| || ||||| || || ||||||| Sbjct 1593 GTGA---TCAACTATCGCGAAGCGTACGACATGTTCGCCTGCAACGGCATCCTGTTCAAT 1649 Query 22621 CACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAA--CACTCGGTG 22675 ||||| || ||| | ||||| || ||||||||||| || ||||| | | ||||||| Sbjct 1650 CACGAGTCGCCGCGCCGGGGGGAGAACTTCGTGACGCGCAAAATCACCCGCTCGGTG 1706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634972198732360