Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6779 102 1e-16 seq3725 82.4 9e-11 >seq6779 Length=15061 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||||| ||||| || | ||||| || |||||||||||||||||| ||| ||| Sbjct 3055 CTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTT 3114 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | ||| || | ||||| |||||||| || || ||||| || ||| |||||| ||||| Sbjct 3115 CGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGA 3174 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| ||||| || ||||| || || ||| || ||||| Sbjct 3175 GCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 3213 >seq3725 Length=17844 Score = 82.4 bits (90), Expect = 9e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 |||||| || || || ||||| || ||| | || |||||| || ||| | || || || Sbjct 16965 CTATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGC 16906 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT--GGA 163663 ||||| | || |||||| |||| | ||| ||| || || |||||||| ||| Sbjct 16905 CGGTGTCGTCGACGAAGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCACTCGGA 16846 Query 163664 GACAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACA 163704 |||||| |||||| || |||| || || ||||||||||| Sbjct 16845 GACAAA--CTTTGAAGTTAAGAAAGGTGATCGCATCGCACA 16807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620585437524880