Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3725 105 8e-18 seq551 96.9 4e-15 seq7263 82.4 9e-11 >seq3725 Length=17844 Score = 105 bits (116), Expect = 8e-18 Identities = 129/174 (74%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 ||| || ||||| || ||||| || ||||| |||||||| ||||| ||| ||| | || Sbjct 16971 AGGTTGCTATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGT 16912 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 || || || ||| |||| || || || | ||| ||| || || |||||||| Sbjct 16911 GGGCGCCGGTGTCGTCGACGAAGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCA 16852 Query 158592 T--GGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 |||||||| ||||||| |||||||| |||||||||||||||||| || || Sbjct 16851 CTCGGAGACAA--ACTTTGAAGTTAAGAAAGGTGATCGCATCGCACAGTTTATT 16800 >seq551 Length=34241 Score = 96.9 bits (106), Expect = 4e-15 Identities = 318/482 (66%), Gaps = 18/482 (4%) Strand=Plus/Minus Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556 |||| |||||||| || || || || || || || | || || || || || ||||| Sbjct 2127 ATCTGCCGATCGAAGCGGCCCGGTCGCAGCAGCGCCTTGTCGAGGATGTCCACCCGGTTG 2068 Query 11557 GTAGCGGCAATGACTACAATGCCAGTC-TCAT--TGTCGAAACCGTCCATTTCTGTGAGA 11613 || ||||| | || || | || || | | ||| ||| |||||||| || || Sbjct 2067 GTGGCGGCCAGCACGACCA---CATTCGTGGTCGTGTTGAACCCGTCCATCTCCACCAGC 2011 Query 11614 AGCTGGTTGATCGTCTGTTCAC--GCTCATCGTTGGAGGGCATACCACCTGCCGAACGC- 11670 |||||||| | || ||||| | |||| || || | | | | |||| | ||| Sbjct 2010 AGCTGGTTCA--GTGTGTTCTCCTGCTCCGAGT-GGCCGCCGAAGCTTTTGCC-ACCGCG 1955 Query 11671 --TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTG 11728 ||| | ||||| || || || || |||||||| | || ||||| ||| || | Sbjct 1954 CTTTCGT-CCGACCGCATCGATTTCGTCGATGAAGAGAATGCACGGCGCGTTCTTGCGGG 1896 Query 11729 CCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 || |||| | || ||||| ||| || ||| || || || ||||| || | ||| | Sbjct 1895 CCATGGCGAACATGTCGCGTACGCGCGACGGTCCCACTCCGACAAACATTTCCAAGAACT 1836 Query 11789 TTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847 | | || ||| | ||||||||| ||||| | || || || |||| ||||| Sbjct 1835 CCGACCCGGA-CACGGTAATGAAGGGTACATTTGCTTCCCCTGCCGTGGCCTTCGCGAGC 1777 Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 || || ||||||||||| || | || | || | |||||| ||| ||||||||||| Sbjct 1776 AGCGTTTTACCCGTACCGGGCGGTCCGGTCAGCATGGCGCCCTTGGGAATCTTGGCACCG 1717 Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTG 11967 | | ||| ||| || || |||||||||| |||| |||| || ||| |||| Sbjct 1716 AGATCGATGTATTGCTGGGGGTTTTTGAGGAAGTTGACAAACTCCATAATTTCGATCTTG 1657 Query 11968 GC 11969 || Sbjct 1656 GC 1655 >seq7263 Length=8888 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 167506 AGCTTCGTAAAGATGTACCTCGT-CTGAGACGCA-TCCTTGCCACCCATGAGGCGTGTAC 167563 ||| |||| ||||||||||| | ||| ||| |||||||||||| | || || |||| Sbjct 5601 AGCATCGTGAAGATGTACCTGGGGCTGG--CGCTGTCCTTGCCACCCGTCAGCCGCGTAC 5658 Query 167564 CAAATTGACCACATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCA 167623 | || ||||| | || | || ||||||||||| || || || | | |||| Sbjct 5659 CGAACTGACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCA 5718 Query 167624 ACTTGACGATCGTTTCAGC-GAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCC 167682 |||| ||||| | ||| ||| || | |||||||| ||||| || |||||| ||| Sbjct 5719 GGTTGATGATCG-TCGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCC 5777 Query 167683 ACATATGCTGCCAACTGTGCAACCTTCATCTC 167714 || | | |||| ||| || ||||||| ||| Sbjct 5778 ACCGAACCGGCCAGCTGGGCCACCTTCACCTC 5809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588827070056200