Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8504 125 8e-24 >seq8504 Length=8995 Score = 125 bits (138), Expect = 8e-24 Identities = 437/673 (65%), Gaps = 17/673 (3%) Strand=Plus/Minus Query 105940 GTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 105999 ||||| |||||| || || || ||||||| || || | |||||||| ||||| || || Sbjct 2735 GTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGT 2676 Query 106000 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAG 106059 ||||| || |||| || || || |||| || | | ||| |||||| | Sbjct 2675 CGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAA 2616 Query 106060 AACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC- 106116 | |||||| | || | | | |||| | |||| |||| || | || || | Sbjct 2615 CTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGCAGAATG 2558 Query 106117 CCCTTGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT 106175 |||||| || || | ||||| | ||||| || | ||| | | |||| | Sbjct 2557 CCCTTGCTCACCGGGCTG--CCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCT 2500 Query 106176 CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCT 106235 |||||||||| ||||| | ||| || |||||||| || || | ||| | || | Sbjct 2499 CACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 2440 Query 106236 TGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAA 106295 || || || || | | ||||| || || || |||| || | || || | Sbjct 2439 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 2380 Query 106296 CACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGAT 106352 | || | || || |||||||| |||||||| || ||| || ||| ||||||| Sbjct 2379 CGCCGATGCCGATCGGTCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCACGGGAT 2323 Query 106353 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAA 106412 | |||| ||||||| | ||| ||||| || || |||| | || ||| | | Sbjct 2322 AGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCA 2263 Query 106413 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | ||| || | ||| | || | |||| || ||| || | | |||||| || | Sbjct 2262 GCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGG 2206 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 ||| |||||| || || ||||||||| | |||||| | ||| || || |||| || Sbjct 2205 CCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAGGT 2146 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 |||||| || || || || | ||||| |||||||| || ||||| |||||||||| Sbjct 2145 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 2086 Query 106593 AGAGCATGTAGGG 106605 | |||||||| || Sbjct 2085 ACAGCATGTACGG 2073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589831615979960