Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2589 120 2e-22 >seq2589 Length=18080 Score = 120 bits (132), Expect = 2e-22 Identities = 235/342 (69%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| |||||||| || || ||||||| || || | ||||||||||| ||||||||||| Sbjct 8782 TAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 8841 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987 || || || || | ||| |||| | || || | ||||||||| |||||||| || || Sbjct 8842 CACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 8901 Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG--AGGCCCAAGTCTTTG 30045 ||| ||||||| || | |||||| || || | |||||| ||| | || Sbjct 8902 AACGAAAAACTGTGCCAAGCAGTGGCATGGTGGTAAGGCCATGTTAGG--AATATCAGAA 8959 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 || ||||| ||||||| |||||| || | || | || |||||| | || ||| | Sbjct 8960 GGATTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTCTTAATTTTGTCGATC 9019 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCT--CATGTCCGTGTACT 30163 | | ||||||||| | ||| || | || || | | | ||||| ||||| Sbjct 9020 ACTTCAGCCAGCTGATCTATTCCCTGACCTGTATAATC-GTCGTGGCATGT-TTTGTACG 9077 Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCA 30205 || || || || | |||||| ||||| || ||||| |||| Sbjct 9078 TGGCACCAAAGTGACGCCACTGAAACCCATATACCGGACCCA 9119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408516859033817