Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8504 293 4e-74 seq6779 159 6e-34 seq17582 100 5e-16 >seq8504 Length=8995 Score = 293 bits (324), Expect = 4e-74 Identities = 880/1331 (66%), Gaps = 78/1331 (6%) Strand=Plus/Minus Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || ||| |||| || | |||||| || || || ||||| | ||| | ||||| ||| || Sbjct 2788 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 2729 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| ||||||| || ||||| || ||||| ||||| ||| || || ||||| Sbjct 2728 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 2669 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080 || |||| ||| || || | | ||||||| | |||| | | ||| ||| Sbjct 2668 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 2609 Query 213081 CAGTCCCATCTGCCAGACAGGTCC-TCG--TCCTTCACGTTCCACATGTCAAACTGCAAG 213137 |||| ||| ||| ||| ||| ||||| ||||||||| || |||||| Sbjct 2608 CAGTTCCA---------CAGATCCGTCGGTTCCTT---GTTCCACATCTCGTACTGCAGA 2561 Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTT-GGCCAG 213196 ||||| |||||||| |||||||||| ||| | ||| || |||| ||| |||||| Sbjct 2560 ATGCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCAT-CTCGAGCGGCCAG 2502 Query 213197 CTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256 ||| ||| ||| | ||| || |||||||||||||||| ||||| | | || ||||| Sbjct 2501 CTCACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTT 2442 Query 213257 CTTGGCCTC------TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAG 213310 | ||||| | | ||| || |||||| || |||| |||| |||| Sbjct 2441 TTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGAT------GAACGCATCGGCCAT 2388 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTC 213367 ||||| || ||||||||||| |||||||| | || || || ||| ||| |||| Sbjct 2387 GCCCTGCACGCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTT--AGC-CTCCGG 2331 Query 213368 CAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACT---TTGGT 213424 || ||| || | ||| || ||||| ||||| || ||||| || |||| || | Sbjct 2330 CACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGT---CACTGTCTTAGC 2274 Query 213425 GACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGG 213481 ||| | ||| | | | | | |||| ||| ||| |||||| Sbjct 2273 GACTTCCTTCAGCT--TTGCAAAGTCATACGT----TTTGTCTTGCTTTACAAACATGTT 2220 Query 213482 CAGGGCGATGCTGGCCAGGTTGCAAACGGCCACC---TCCTGAGAGTCTGTGTACTCCAT 213538 || |||||| |||||| ||||| || || ||| |||| || | |||||||| Sbjct 2219 CAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATCCTTCGA---CGAGTACTCCAC 2163 Query 213539 GATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGAC-TTTG 213597 ||||| |||||||||||| ||| ||||||||| | ||||| ||||| || ||| Sbjct 2162 AATCTCAGTGCACAGGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT--ACTTTTA 2105 Query 213598 CG-TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGT 213656 || ||| || ||||||||| |||||||| || ||||| || | ||| || | | Sbjct 2104 CGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATG 2045 Query 213657 ATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTC 213715 ||| ||| || | |||| ||||| ||| |||| | | ||| | | | ||| Sbjct 2044 ATCGCAAACCACAGAT-CCTGCGCCTTCACCTGCCGCAT-AAAGCGACCCTCTT--TCTC 1989 Query 213716 GTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGAC- 213771 |||| ||| |||| | ||| || | ||||||| ||||| || || |||| Sbjct 1988 GTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG---GTGTCCGATAGCCCGGGACA 1932 Query 213772 AGGATGCGGGACACATGAGGCTCCA-GTCCCCGTCATCTCTGACTCTCTGCATGAACAGG 213830 | |||||| ||||| |||||||| | | || ||| || | ||||||||||||| Sbjct 1931 ATCGTGCGGG-CACATCAGGCTCCACATTTCGTTCGCCTC-CACACGCTGCATGAACAGG 1874 Query 213831 TCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTT 213890 ||||| | ||| || ||| |||| ||||| | | ||| ||| || | |||| Sbjct 1873 TCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTT 1814 Query 213891 TTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAG 213950 || |||||| ||||| || || || || | ||||||||||| | |||||||| || Sbjct 1813 TTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAAT 1754 Query 213951 GCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGC 214007 || || |||| | ||||| ||||| || || || ||| ||||| ||| |||| Sbjct 1753 GCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGC 1694 Query 214008 AGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCC 214067 || | || ||||| ||||| || ||||| || || | || |||| || || Sbjct 1693 AGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCG 1634 Query 214068 CTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGC 214127 | | | || | || || ||||||||||| | || || || | || || || Sbjct 1633 CGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGATTTCGAAATTAGAGCACACTGC 1574 Query 214128 CTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTC 214187 ||| || || |||||| | ||||| || || | | | ||| || ||||||| | Sbjct 1573 TTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGAC 1514 Query 214188 GAGAGCTGGGG 214198 || |||||||| Sbjct 1513 GAAAGCTGGGG 1503 >seq6779 Length=15061 Score = 159 bits (176), Expect = 6e-34 Identities = 284/414 (69%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| |||| || || |||| ||||| | ||||| || ||||||||| | Sbjct 3391 CAGCAAACGATCGGCCACAAACTCAATGTACTGCGACATCAGATCACAGTTCATGCCAAG 3332 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | ||| |||| ||||| || || ||||||| ||| ||| | || || || | | Sbjct 3331 CATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCAGGACCGCATCGCGGAT 3272 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| | | ||||| || || || || | ||| | |||| | | || ||| Sbjct 3271 GATCTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGA---ACATCAGGCA 3215 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| | ||||| |||||||| || ||| ||| |||| |||||| ||| || Sbjct 3214 GGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCC 3155 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || || |||||||| || || ||||| || ||||||||| Sbjct 3154 CGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGAT 3095 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 ||||| || || ||||| || || || ||| || || || |||||| ||||| Sbjct 3094 ACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCTCGAGAT 3035 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||| ||||||||||| |||||| |||| | ||| |||| ||| || ||||| Sbjct 3034 CCAGTTCAGCGCCCAGTCCGCCTTCCTCTTCACGCACGGCAGCGTTTCGATGGC 2981 Score = 120 bits (132), Expect = 6e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||||||| ||||||||| || || || |||||||| ||||||||| | || || Sbjct 2827 GTACATCTCACTGTGCACATTTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCTTC 2768 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 |||||||| || | ||| | |||| ||||||||| || || || || || || Sbjct 2767 CGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGA 2708 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || ||||||||||| || || || | ||| ||||| ||| | | | || | | Sbjct 2707 CGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGTGGCGTTCGCTCGGTTTCAGCGTCTC 2648 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 |||| ||| | ||| ||| ||| || || |||||||| ||||||||||| || Sbjct 2647 CCAGTCCTTCATGTCCTTGGACAGATCAACCTCTTCCACCGTCCAGAAGGAAGC 2594 >seq17582 Length=1880 Score = 100 bits (110), Expect = 5e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 ||| ||| ||||||| |||||||||| || |||||| || || || ||| ||||| Sbjct 1383 CTTCAGCTCCTTCACCCGCTCCTCCAGCTTCGAGATGCGCTCGAGCTTCCGCTTCCGGCA 1324 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| || | |||||||| || | ||| || ||| ||||||||| ||||| Sbjct 1323 CTTGGAGGCGGCGACCCGGTTCCGCAGCCGCTTGCGCTCCAGCTTGATGCGCTCCTGCGA 1264 Query 241609 CTCCATGTCGATCGG 241623 ||||||||||||||| Sbjct 1263 CTCCATGTCGATCGG 1249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931297250287360