Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8504 192 1e-43 seq6779 132 9e-26 >seq8504 Length=8995 Score = 192 bits (212), Expect = 1e-43 Identities = 451/670 (67%), Gaps = 17/670 (3%) Strand=Plus/Minus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 |||||| || || || || ||||| ||||| | |||| | ||||| || || || Sbjct 2207 GGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAG 2148 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 |||| || |||||||| || | | | || ||| || |||||| ||| ||||| Sbjct 2147 GTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTT 2088 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| ||||| | || |||| || |||| ||| | | | ||| ||| || || Sbjct 2087 GTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATC 2028 Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 ||| || ||||| || | | | |||||| ||| | ||||| || || ||| Sbjct 2027 -CTGCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCT---CGTACCCCGTGTACAGCT 1972 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTG-GCGGGACACATCAGA 222010 | || |||| ||| || | | || || || ||||| | ||||| |||||||| Sbjct 1971 TCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGG-CACATCAGG 1913 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 ||||| | ||| | | || | ||||||||| |||||||| ||||| || || | | Sbjct 1912 CTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAA 1853 Query 222071 AAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128 || | || | || ||| | ||||||| |||| |||||||| ||||||| | ||||| Sbjct 1852 AACATGTCCC--GTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACT 1795 Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 | || || || | ||||||||||| ||||||| ||| | || ||||| |||||||||| Sbjct 1794 CGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGC 1735 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248 |||||||||| || || || | |||| ||| ||| || |||| ||||| |||| Sbjct 1734 CACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGT 1675 Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCA--G 222305 | || ||||| || || ||||||| || || | || ||| | ||| Sbjct 1674 TCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGC---GGATACAGTGCACGT 1618 Query 222306 ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGA 222365 || ||||| |||||||| |||||| || | || || ||| || ||||| || Sbjct 1617 TCAGTCCGATGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGA 1558 Query 222366 TGCCCTCCAT 222375 ||||||| || Sbjct 1557 TGCCCTCAAT 1548 >seq6779 Length=15061 Score = 132 bits (146), Expect = 9e-26 Identities = 186/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 25775 AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834 |||||| || ||||| ||||||||| | || || | |||||||||||| | Sbjct 2963 AGAGAGTTC--CTGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGAGGAAGGCGGACT 3020 Query 25835 GGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 |||| |||| |||||| ||| ||| || | |||||||||||| | || || || | Sbjct 3021 GGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCG 3080 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGA 25954 |||| || ||||| ||||| ||||||||| || || || ||||||||||| ||| || Sbjct 3081 CTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGC 3140 Query 25955 AGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCC 26014 || ||||| || || ||| || |||||||| ||| | ||||| || || | Sbjct 3141 GTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGC 3200 Query 26015 ACAGAGATTTTGCCTGCCTG 26034 || | || |||||||||||| Sbjct 3201 ACTGCGACTTTGCCTGCCTG 3220 Score = 125 bits (138), Expect = 1e-23 Identities = 185/257 (72%), Gaps = 14/257 (5%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569 |||||| | |||||| |||||||| ||||||||||| | | |||| | |||| | || Sbjct 2602 CTGGACGGTGGAAGAGGTTGATCTGTCCAAGGACATGAAGGACTGGGAGACGCTGAAACC 2661 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | ||| | || || || ||||| |||| |||||||| || || || ||||| Sbjct 2662 GAG--CGAACGCCACTTCATCTCCCACGTGCTGGCCTTCTTTGCCGCGTCCGACGGTATC 2719 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGT 25687 ||||||||||||||| || | |||| | ||| |||||| ||| ||| || | Sbjct 2720 GTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGGTTAC--GGAAGCGCGCT 2777 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC 25747 | |||||||| |||||||| || || |||||||||||| |||| |||| | ||| | Sbjct 2778 GCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGTGAGATGTA---CTCGCTGC 2834 Query 25748 TGAT---GACGTACATT 25761 |||| ||||||||| Sbjct 2835 TGATCGACACGTACATT 2851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928609929981760