Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq104 98.7 1e-15 >seq104 Length=60934 Score = 98.7 bits (108), Expect = 1e-15 Identities = 231/345 (67%), Gaps = 3/345 (1%) Strand=Plus/Minus Query 47963 AAGTT-TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATT 48021 ||||| || || || | || || || ||||| || || || || | ||||| |||| Sbjct 1678 AAGTTCTCCCCCCGGCGCGGCGACTCGTGATTGAACAGGATGCCGTTGCAGGCGAACATG 1619 Query 48022 CCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATA 48080 |||| | ||| |||||||| | || ||||||||||| || | | ||| |||| | || Sbjct 1618 TCGTACGCTTCGCGATAGTTGATCACAATCCAGTACCCGTACA-TCTTGGCACACGCGTA 1560 Query 48081 AGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATA 48140 || || || |||||||| || || | || |||| || ||||| |||||| || || Sbjct 1559 CGGCGAGCGGGGATAGAACGGGGTCTTTTCGTTCTGGGGCGTCTCCGCCACCTTGCCGTA 1500 Query 48141 AAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGAC 48200 || || || ||||| || |||| || ||| | ||| | | | | |||| Sbjct 1499 CAGCTCGGACGTCGATGCCTGGTAGAAGCGGACCGTCCGCTCCTGCCCCACCGTGCGGAT 1440 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || || |||| | ||| || || | ||||| || | || |||||| || || Sbjct 1439 AGCATCGAGCAGCCGCAGCGTACCGACCGCATCCACCTCCGCCGTGTACTCGCTCAGATC 1380 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||||||| ||| || || ||||| || | ||||| || || || Sbjct 1379 GAACGAAATCTTCACGTGGCTCTGGGCGGCCAGATTGTATATTTC 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665326121422280