Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq8044 334 1e-86 seq1160 237 2e-57 seq2002 154 2e-32 seq1819 132 6e-26 seq214 84.2 3e-11 >seq8044 Length=8054 Score = 334 bits (370), Expect = 1e-86 Identities = 984/1511 (65%), Gaps = 19/1511 (1%) Strand=Plus/Minus Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| || ||||| || || |||||||| || ||||| || Sbjct 5997 GTCGAGATCATCGCCAACGACCAGGGCAACCGAACCACGCCATCGTATGTGGCCTTCACT 5938 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || ||||| |||| ||||| || || || ||| || |||||||| | ||| Sbjct 5937 GATACGGAGCGTCTGATTGGCGATGCTGCCAAGAACCAGGTGGCCATGAACCCGACCAAC 5878 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| |||||||||||||| || || |||||||| ||| |||| | | Sbjct 5877 ACCATCTTCGACGCGAAGCGTCTGATCGGCCGCAAGTTCGACGATCCCGCGATCCAGGCC 5818 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCT----GATAAGCCTATGAT 195594 || || ||| ||||| | | || || || || | | | ||||| | || Sbjct 5817 GACATGAAGCACTGGCCGTTCGAGGT-------GGAGTCGATCGAGGGCAAGCCAAAAAT 5765 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCG-TCTATGG 195653 || || | | || |||||||| || ||||| || | | | || |||| Sbjct 5764 CGCGGTCGAGTACAAGGGCGAGAAGAAGTGCTTCT-TCCCGGAGGAGGTCAGCTCGATGG 5706 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 || ||| ||||||||||| || || ||| | | | |||| || || |||| | || | Sbjct 5705 TGCTGACCAAGATGAAGGAAACGGCCGAAGCCTACCTGGGCAAGACGGTGACGAACGCCG 5646 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | || || || || ||||||| || || || || |||||||| ||||| || | | Sbjct 5645 TCATCACCGTGCCAGCCTACTTCAACGACTCGCAGCGCCAGGCGACGAAGGATGCCGGTA 5586 Query 195774 CTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTT 195833 | || |||| || ||| || | || ||||| || || || ||||| || || || | Sbjct 5585 CCATCTCGGGACTGAACGTGCTGCGCATCATCAACGAGCCGACCGCGGCCGCCATCGCGT 5526 Query 195834 ATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893 | |||||||||||||| | | || || || || ||||||| |||||||| || | Sbjct 5525 ACGGTCTGGACAAGAAGACCGCCGGTGAGCGCAACGTGCTGATCTTCGATCTCGGCGGCG 5466 Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953 | || || || || || |||| || || | ||| || ||||| || ||| | || | Sbjct 5465 GCACCTTCGACGTGTCGATTCTTTCCATCGACGATGGCATCTTCGAGGTCAAGTCGACCG 5406 Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG 196013 | || || || ||||| || ||||| || ||||| ||||| | || || | Sbjct 5405 CCGGAGACACCCATCTGGGCGGTGAGGACTTCGACAACCGTCTGGTGAACCACTTCGCAC 5346 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | || ||| || ||| | ||||| ||| | || || | || || || || | Sbjct 5345 AGGAATTCAAGCGCAAGCACAAGAAGGATCTGTCCACCAACAAGCGCGCCCTGCGCCGAC 5286 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 | | || || || || || || || || || ||||| || || | || | | ||| Sbjct 5285 TGCGCACGGCGTGCGAGCGCGCAAAGCGCACGCTCTCGTCGTCGACGCAGGCGAGCATTG 5226 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 |||| |||||| |||| || |||| || ||||| || | || || || || || || | Sbjct 5225 AGATCGATTCGCTGTTCGAGGGAACCGATTTCTACACCTCGATCACGCGCGCCCGCTTCG 5166 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||| | ||| | || |||| | | ||||| || || || | | || || | Sbjct 5165 AGGAGCTGAACGCCGACCTGTTCCGCTCGACGATGGAGCCGGTCGAGAAGGCGCTGCGCG 5106 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 |||| |||||||| ||| | | | | || || || || ||||| ||||| || || | Sbjct 5105 ACGCCAAGATGGACAAGGCGAGCATCCACGACATCGTGCTGGTGGGTGGATCGACGCGCA 5046 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 | |||||| | || || |||| ||||||||| || || || ||||| | | Sbjct 5045 TCCCGAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGCAAGGAGTTGAACAAGTCTA 4986 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433 |||||||||| || || || || || ||||| ||||| ||||| || || || || | Sbjct 4985 TCAACCCGGACGAGGCCGTCGCGTACGGTGCCGCCGTCCAGGCCGCCATCCT-GCA--CG 4929 Query 196434 TTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490 ||||| | | || || ||||| ||||| || || || | || | || || | Sbjct 4928 GCGACAAGTCGGAGGAGGTGCAGGATCTGCTGCTGCTCGACGTGACCCCGCTGTCGCTCG 4869 Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550 || | || || ||||| || || ||| | | || | | ||||| || || |||| Sbjct 4868 GTATCGAGACGGCGGGCGGCGTGATGTCGGTGCTGATCAAGCGCAACACGACCATCCCGA 4809 Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610 | ||| || || || | ||||| || || || || || || || | || || | Sbjct 4808 CCAAGCAGACGCAGACGTTCACCACGTACTCGGACAACCAGCCGGGCGTGCTGATCCAGG 4749 Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670 | | || || || ||| || | ||||| ||| | || || || | ||||| ||| Sbjct 4748 TGTTCGAGGGCGAGCGCGCCATGACGAAGGACAACAACCTGCTCGGCAAGTTCGAGCTGA 4689 Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 || || || | ||||| | || || || ||||| | || ||||| || |||| Sbjct 4688 GCGGCATCCCGCCGGCACCGCGCGGCGTGCCCCAGATCGAGGTGACGTTCGACATCGACG 4629 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 | || || || || ||||| || || || ||| | | ||| | ||||| Sbjct 4628 CGAACGGTATCCTGAACGTGACGGCGCTCGAGAAGTCGACCAACAAGGAGAACAAGATCA 4569 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 || || || |||||||| || || |||||||| || || || ||||| | || | Sbjct 4568 CCATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGG 4509 Query 196851 CGGAAAAGTAC 196861 | || |||||| Sbjct 4508 CCGAGAAGTAC 4498 >seq1160 Length=33927 Score = 237 bits (262), Expect = 2e-57 Identities = 806/1241 (65%), Gaps = 16/1241 (1%) Strand=Plus/Minus Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAA-CTGT 195702 || || |||||| ||| ||||||||||| || || ||| | | | | || || | | | Sbjct 19282 TCCTCGATGGTGCTGACCAAGATGAAGGAAACGGCCGAAGCGTACCTCGGCAAGAGCATT 19223 Query 195703 GAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAA 195762 | | | || || | || || || || ||||||| || || || || ||||| || || Sbjct 19222 GCCA-ACGCCGTCATCACCGTGCCGGCGTACTTCAACGACTCGCAGCGCCAGGCCACGAA 19164 Query 195763 GGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGC 195822 ||| || | ||| || || || | ||| || | || ||||| || || || ||||| Sbjct 19163 GGATGCCGGTGCGATCGCCGGGTTGAACGTGCTGCGCATCATCAACGAGCCGACGGCGGC 19104 Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882 || ||||| || || ||||||||||| || || || || || ||||||| || Sbjct 19103 CGCCATTGCGTACGGGCTGGACAAGAAGGGGGCCGGCGAGCGGAACGTGCTGATCTTCGA 19044 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 |||||| || || || || || || || | |||| || || | ||||| || || || Sbjct 19043 TCTCGGCGGCGGCACCTTCGACGTGTCGATCCTCACGATCGAGGACGGTATCTTTGAGGT 18984 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCG 196002 ||| | || || || || || ||||| || || || || || || || | | Sbjct 18983 GAAGTCGACGGCCGGCGACACCCATCTCGGCGGCGAGGACTTTGACAACCGCATGGTGTC 18924 Query 196003 TCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGG 196061 || |||||| || |||||| || ||| | ||||| || ||| | | || | | Sbjct 18923 GCACTTTGTC-GAGGAGTTCAAGCGCAAGCACAAGAAGGACATTACGAGCAACAAGCGCG 18865 Query 196062 CTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTC 196121 | || || || | | || || || || || || || || || || || | | | | Sbjct 18864 CGCTCCGCCGATTGCGCACGGCTTGCGAGCGGGCAAAGCGCACACTGTCCGCGTCCACCC 18805 Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | ||| | ||||| || ||| ||| || || || || ||||| || | || || Sbjct 18804 AGGCAAGCATCGAGATCGACTCGCTGTACGAGGGCATCGATTTCTACACCTCGATCACGA 18745 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACC--TGTTGA 196239 | || || || || ||| | || || || |||| | | ||||| || ||| || Sbjct 18744 GAGCCCGGTTCGAGGAGCTCAATTCGGACCTGTTCCGCGACACGATGGAGCCGGTGTCGA 18685 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 | | ||| || || || |||||||| ||| | | | | || || || || || || Sbjct 18684 AG--GCACTGCGCGATGCCAAGATGGACAAGGCCAGCATCCACGACATCGTGCTCGTCGG 18627 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGA 196359 ||||| ||||| ||||| ||| | || || |||| ||||||||| || || Sbjct 18626 TGGATCGACCCGCATTCCCAAGGTACAGAAGCTGCTGCAGGACTTCTTCAACGGCAAGGA 18567 Query 196360 TTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGC 196419 | |||||| ||||||||||||| || || || || || || || ||||| ||||| || Sbjct 18566 GCTGAACAAATCGATCAACCCGGACGAGGCCGTCGCGTACGGGGCCGCCGTGCAGGCCGC 18507 Query 196420 TATTCTCTCAGGTGTTGACA-ATAATAA--CGTCCAAGATCTTCTGCTACTTGATGTTGC 196476 || || ||| | ||||| | || || || ||||| ||||| || || || | Sbjct 18506 CATCCT-GCAG--GGTGACACGTCGGAAGCGGTTCAGGATCTGCTGCTGCTGGACGTGAC 18450 Query 196477 ACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAA 196536 ||| | || ||||| | ||||| || || || || ||||| | || | | || Sbjct 18449 GCCCCTGTCGCTGGGCATCGAAACGGCCGGCGGCGTGATGACGGTGCTGATCAAGCGCAA 18390 Query 196537 CACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGG 196596 ||| || || ||||| ||| || ||| || | || || || || ||||| || || Sbjct 18389 CACCACGATCCCGACGAAGCAGACGCAAACGTTCACCACCTACTCGGACAATCAGCCGGG 18330 Query 196597 TGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG 196656 || ||||| || | ||| || || ||| || | ||||| ||| |||| || || Sbjct 18329 CGTGTTGATTCAGGTGTTTGAGGGTGAGCGCGCCATGACCAAGGACAACAATCTGCTGGG 18270 Query 196657 AACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTG 196716 | ||||| ||| || || || | ||||| | ||||| || ||||| | || Sbjct 18269 CAAGTTCGAGCTGAGCGGCATCCCGCCGGCACCGCGCGGTGTGCCCCAGATCGAGGTGAC 18210 Query 196717 CTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAA 196776 |||||||| ||||| || || || | ||||| | || || ||| | | | | Sbjct 18209 GTTCGATATCGACGCGAACGGTATCATGAACGTGTCGGCGATCGAGAAGTCCACCAAC-A 18151 Query 196777 ATCTGAAAAG-ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAAC 196835 | ||| | || ||| || || |||||||| || || |||||||| || || | Sbjct 18150 AGGAGAACCGCATCACGATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGACATCGATC 18091 Query 196836 GTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 | ||||| | || ||||| |||| | | | || |||||| Sbjct 18090 GGATGGTGAACGAGGCGGAGAAGTTCCGCAACGAGGACGAG 18050 >seq2002 Length=20453 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || |||||||| || || || || || ||||| || ||||| ||| | || Sbjct 18452 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 18511 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || || ||||| || || |||||||||||||| || |||||| Sbjct 18512 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 18571 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || ||||| || || ||| | || |||||| Sbjct 18572 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 18631 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| ||||| || || || || || || || | || || |||||| Sbjct 18632 ATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGGT 18679 >seq1819 Length=21526 Score = 132 bits (146), Expect = 6e-26 Identities = 247/362 (68%), Gaps = 3/362 (1%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 || || || || || ||||| | |||||| || ||||||||||| || || ||| | Sbjct 19481 TTCGCGCCGGAGGAGATTTCCGCGATGGTGCTGGGCAAGATGAAGGAAACGGCCGAAGCG 19540 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | | |||| || | |||| |||| || || || || || || ||||||| ||| | Sbjct 19541 TACCTGGGCAAGAAGGTGACCCATGCCGTCGTTACCGTGCCGGCGTACTTCAACGATGCG 19600 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || || |||||||| |||||||| | | || || ||||| | | || ||| Sbjct 19601 CAGCGCCAGGCGACGAAGGACGCGGGAACGATCGCCGGTCTGGTGGTGATGCGCATCATC 19660 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || ||||| || || ||||| || ||||||||| ||||||| || || Sbjct 19661 AACGAGCCGACTGCGGCCGCCATCGCTTACGGACTGGACAAG---AAGGACGGCGAGAAG 19717 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || || || | || ||||| || || ||||| || || || || || || | || || Sbjct 19718 AACGTGCTGGTGTTCGATCTGGGCGGCGGTACCTTCGACGTGTCGCTGCTGACCATCGAC 19777 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 || | ||||| || ||| || ||||| || ||||| || || ||||||||| Sbjct 19778 AACGGCGTGTTCGAGGTGGTGGCCACGAACGGTGACACCCATCTGGGCGGCGAAGATTTC 19837 Query 195986 GA 195987 || Sbjct 19838 GA 19839 >seq214 Length=55657 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG--T 171919 ||||| |||||||| || || | || || ||||| |||||||| || || || ||| | Sbjct 2963 ATGCAGATCTTTGTAAAGACGTTAACCGGGAAAACGATCACCCTTGATGT-GA-TCGCTT 2906 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || | |||| ||| ||| ||| || | ||||||||| |||| |||| Sbjct 2905 CGGAAACGGTTTTGGACATTAAAAGCAAAATTGAACAACGTGAAGGCATTTCACCAGATC 2846 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | || ||||| ||||||||||| || || || || | | | | || |||| Sbjct 2845 AGCAGCGAATCATCTTTGCCGGTAAACAGCTGGATGACGGTCGGATCATATCCGACTACA 2786 Query 172040 AC 172041 || Sbjct 2785 AC 2784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657696051268880