Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8504 390 1e-103 seq8412 132 4e-26 seq2002 125 6e-24 >seq8504 Length=8995 Score = 390 bits (432), Expect = 1e-103 Identities = 1178/1792 (66%), Gaps = 53/1792 (3%) Strand=Plus/Minus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || || ||||||| || |||| |||| || || || | |||||| ||||| || Sbjct 3127 TTGTCCACCGTAAACTGGATTGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCCA 3068 Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273 ||||| ||||| | | |||| |||| | || ||||| || || | || | || Sbjct 3067 GTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGC 3008 Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333 | ||| | ||||| |||||||| ||||||||| || ||||| ||||| |||| Sbjct 3007 TCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGCC 2948 Query 138334 ATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 || || || | |||| |||||||| || || ||||| || || ||||| | Sbjct 2947 ATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCC 2888 Query 138394 CGCGGTATTGTTGCAATATTTTGAAT-GCTCCC--GTTGGCCGCAATGATGCGATTTCTC 138450 ||||||| | || || ||||| || | ||| ||||| | ||| | || | | || Sbjct 2887 TGCGGTATAGCCGCTATCTTTTGGATCGATCCATTGTTGGACAGAAT--TTCGTTCT-TC 2831 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 ||||| | ||||| || ||| |||| || | | |||| ||| | ||| Sbjct 2830 ATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACC 2771 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 || || || || | || || || | | ||||| ||| ||| | ||||| |||||| Sbjct 2770 TGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGAT 2711 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || ||||| || ||||| || ||||||| || |||||||| |||| || || ||| Sbjct 2710 TCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAA 2651 Query 138631 TTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCG 138687 || || | ||||| |||| || |||||| | | | ||||| ||||| ||| Sbjct 2650 TTGCGAATGCCGTG---CTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCC 2594 Query 138688 CTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | |||| ||||||||||| |||||||| | || ||| || | || ||||| ||| Sbjct 2593 GTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCTCG 2534 Query 138748 TACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACCATA 138806 |||| ||||| ||| | ||| || |||| ||| |||||| || || || || || Sbjct 2533 TACGTCTCGTACGGACC-ATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGTGCGCCGTA 2475 Query 138807 GTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCAT 138866 ||| || |||||| || |||||||| ||| | | ||||| |||| |||||||| Sbjct 2474 GTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATA 2415 Query 138867 GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCG 138926 ||| | || ||||||| ||||||| || |||||||| | |||| || | ||||| Sbjct 2414 GCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGGTCTGTGGCG 2355 Query 138927 CAGATTTGA-CGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGTT 138983 || ||| || ||||| | || || | ||||| || || ||||| ||||||||||| Sbjct 2354 CATATTGGAGCGCTT---AGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTT 2298 Query 138984 TAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGTGCCCC 139042 | ||| ||| || ||||| || | | || | | || |||| || || || Sbjct 2297 CAGATTGCGCGTCACTGTCTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGT----- 2244 Query 139043 CGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCG 139102 ||||| | | ||||| |||| | |||||||| | ||||| |||| Sbjct 2243 -TTTGTCTT------GCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCG 2191 Query 139103 CCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATC 139161 | || || | | | || ||| || ||||| || | |||| || ||| ||||| Sbjct 2190 CTACCTCATCCTTCGACG-AGTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATG 2132 Query 139162 GTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGT 139221 || || | ||| || || || ||||| || || |||||||| ||||| ||||| |||||| Sbjct 2131 GTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGT 2072 Query 139222 GTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGA 139281 ||| |||||||| || | || || || ||| ||| || | | || Sbjct 2071 ACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGC 2012 Query 139282 CGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339 |||| |||| | | || ||||||| ||| || | ||||| ||| || Sbjct 2011 CGCA--TAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCC 1954 Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399 ||| ||| || || || |||| | || || ||||| || ||| | ||||||||| Sbjct 1953 AGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCT 1894 Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459 || ||| ||||||||| ||||| ||||| | ||| | | || || || || Sbjct 1893 CCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGA 1834 Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519 || ||| || |||| |||| | || || || || | || | ||||| | Sbjct 1833 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACG 1774 Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTA 139576 | || ||||||||||| | ||| || ||| |||||||| |||||||||| ||| Sbjct 1773 GCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTG 1714 Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTAC 139636 | | ||| ||| | ||||||| ||||||| |||||||| ||| | ||||| || | | Sbjct 1713 CCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTAC--C 1656 Query 139637 GGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAA 139694 ||| | ||| | || |||| || || || | ||||| || ||| | | Sbjct 1655 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1596 Query 139695 TTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 ||| || |||| | | || | || | | || ||||| || || ||||| || || Sbjct 1595 TTTCGAAATTAGAGCACACT-GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGG 1537 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| || | ||| ||||| |||||||| || || | | ||| | || ||||||| | Sbjct 1536 ACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACATGG 1477 Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCT-C 139872 | || ||||| ||||| | | |||| || | ||| || ||||| |||| | Sbjct 1476 TTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGAT--CGCTGC 1419 Query 139873 A-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGG 139923 | | || ||| || ||||| || | | || ||||||||||| || ||| Sbjct 1418 ATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGG 1367 >seq8412 Length=7683 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 3785 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 3844 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 3845 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 3904 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | |||| || || || Sbjct 3905 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAA 3964 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || ||||| |||| ||||||| || Sbjct 3965 CATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 4012 >seq2002 Length=20453 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || ||||| || || || || || || || || | | Sbjct 18452 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 18511 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||| ||||| ||||| || || || ||||| Sbjct 18512 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 18571 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||||||| | | | || || || ||| Sbjct 18572 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 18631 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||||||||| || || ||||| ||||| | || || || Sbjct 18632 ATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGG 18678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449783837768120