Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq10362 170 2e-37 seq3203 84.2 2e-11 >seq10362 Length=5904 Score = 170 bits (188), Expect = 2e-37 Identities = 166/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || ||||||||||| || |||||||| |||||||| | ||||| || || Sbjct 791 TGCGTTTGAGCTCCCAGCTCGCAGCCAAAGTACTTCGTCGGGTAGGTTGCCGGGCGGCCG 732 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| || | |||| |||||| ||||| || |||||||||||||| ||||| || Sbjct 731 ATCGCGCGCGCCACATCGGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCCTTACCC 672 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| ||| |||||| ||||| ||||| |||||||| ||| | ||||||||| Sbjct 671 TCTACCTTCGCGTTGATGCGGGGCATCTTGTACCGGTAGAAGATGTCGGTCACATTGCGA 612 Query 34624 TTAACGTTCACAGTCCCCATCGTGGCTGGTGTTA 34657 || |||||||| || |||| | |||| | ||| Sbjct 611 TTCACGTTCACGGTAGCCATTTTTGCTGCTTTTA 578 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || | | |||| ||||| | Sbjct 1099 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTTACCTCGAGCGGCCCGTGGAA 1040 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||||||||| |||| | ||| || | || ||||| || || || Sbjct 1039 GCCGCACGCCTTGCAGCCCTGCGAGATCGTACCCTTCTTGGACGAGACGATCAGATCCGT 980 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 |||||||||||| || ||||| |||| |||||||||||||||||| || || |||||||| Sbjct 979 CTCCGGGTTGTCGCACTCCGGGCACAGCACAAACTTGCGGATGAACCCGTCGAGCAGGTC 920 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | ||| | | ||||| || ||||| || ||||| |||||||| Sbjct 919 CTGCAGCTTGGCCGCATCGTGCGAACCGTTCACAATGAAGCGTTCGTT 872 >seq3203 Length=18791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 103738 CGAAGCTGGTTTCTTTTACACCGGCAAAAGCGACAAAGTCAAATGCTTTTACTGCAACGG 103797 ||| ||||| ||||| ||||| |||| |||||| ||||| ||||| ||| ||| Sbjct 18118 CGACGCTGGCTTCTTCTACACGGGCATGAGCGACCGCGTCAAGTGCTTCAGCTGTGGCGG 18177 Query 103798 CGGTCTGAACAATTGGGAGCAAGATGACGACCCGTGGCAACAACACGCGCTTTGGT 103853 || || || | |||||||| || |||||||||||||| || |||||| | |||| Sbjct 18178 TGGGCTCAAGGACTGGGAGCAGGAGGACGACCCGTGGCAGCAGCACGCGATCTGGT 18233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412739817644897