Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1485 118 2e-20 seq6779 114 2e-19 seq1434 111 2e-18 seq5904 104 4e-16 seq8504 102 1e-15 >seq1485 Length=24410 Score = 118 bits (130), Expect = 2e-20 Identities = 242/355 (68%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 2019047 GGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGACG 2019105 ||| || || || | |||| |||||||| ||| | || || |||| | | ||| || Sbjct 21045 GGGTAAAACGACCACCATCCTCTGCCTGGCACGCATCCTGCTCGGGCCCAACTTCCG-CG 20987 Query 2019106 AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCA 2019165 ||||||||||||| || || || || |||||||||| | || || || || || | | Sbjct 20986 AGGCCGTGCTCGAGCTGAACGCTTCCAACGAGCGCGGTATCGATGTGGTACGCAGCAAGA 20927 Query 2019166 TC--AAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCAT 2019223 || || | ||| | || | | || ||||| | ||||| |||||| | | || Sbjct 20926 TCAAAATGTTTGCGCAACAGAAGGTAACG--CTGCCCCGTGGCCGGCACAAGATTGTAAT 20869 Query 2019224 CCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGA 2019283 ||| || || || ||| || | ||| || ||||||||| || || || || ||||| Sbjct 20868 CCTGGACGAAGCGGACAGCATGACGGAGGGGGCCCAGCAAGCGCTGCGGCGAACGATGGA 20809 Query 2019284 AAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGA 2019343 || || | |||||| ||||| |||||||| ||||| || ||| | | |||| || Sbjct 20808 AATCTATAGCAACACAACGCGCTTTGCGCTAGCCTGTAATACGAGCGAAAAGATCATTGA 20749 Query 2019344 AGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398 | | ||||| ||| || || || ||||||| || || |||| |||||| Sbjct 20748 ACCGATCCAGTCCCGGTGTGCGATGCTGCGCTTCTCGAAGCTATCCGATGCCCAG 20694 >seq6779 Length=15061 Score = 114 bits (126), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| ||||| ||||| ||| ||| || ||||| ||||| |||||| Sbjct 3195 CCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 3136 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| || ||| || || ||| ||||| ||||| || || || || Sbjct 3135 TTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAAGAAGATACCCTCAACCGCAGCGAAT 3076 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCC 794518 | |||| |||||| || ||||| |||| |||| | |||||| |||| ||||| Sbjct 3075 GCCACGACCCGCTC-GCCAAAGT----TGGCCTTCTTGCTCGAGATCCAGTTCAGCGCCC 3021 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 | || ||||| || |||| | |||| ||| |||||||| Sbjct 3020 AGTCCGCCTTCCTCTTCACGCACGGCAGCGTTTCGATGGC 2981 Score = 91.5 bits (100), Expect = 2e-12 Identities = 158/225 (70%), Gaps = 10/225 (4%) Strand=Plus/Minus Query 793997 CTTCTCGCACCCGAGC--GACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCAC 794054 ||||||||| || ||| || ||| ||| || ||||| || || ||||||||||| || Sbjct 3412 CTTCTCGCAGCCCAGCTCGA-GCA-GCAAACGATCGGCCACAAACTCAATGTACTGCGAC 3355 Query 794055 ATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTC 794114 || || | ||||||||| | | |||| ||||| | || | | ||||| | | Sbjct 3354 ATCAGATCACAGTTCATGCCAAGCATATCCACCGGCAGTGCCTTCGTCAGGAACTCCTGC 3295 Query 794115 TCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGACGGCTTGTCG 794171 |||||| ||| || ||| |||||||| | | |||| || ||||||||| | Sbjct 3294 TCGATCAGGACCGCATCGCGGATGATCTCC---GTCACGCGCTCCTTCGACGGCTTCTGC 3238 Query 794172 ACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 || || | || | | |||||||||||||||||| ||||| ||| Sbjct 3237 ACCAGATACTTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCT 3193 >seq1434 Length=23895 Score = 111 bits (122), Expect = 2e-18 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||||||||| ||||||| | ||| |||| ||||| | Sbjct 9098 GAAAAGCGCACCGACGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAGGGC 9157 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || || || ||| ||||||| ||||| ||||| || ||||||||| || || || || Sbjct 9158 ACGCTGTTCGAGCTGATCCTGGCCGCGAACTATCTGGACATCAAGGGGCTGCTGGACGTG 9217 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||| || ||||| ||| | ||||||||||| | || || || || ||||| || Sbjct 9218 ACCTGCAAAACGGTGGCGAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAAACG 9277 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 9278 TTCAACATCAAGAACG 9293 >seq5904 Length=10706 Score = 104 bits (114), Expect = 4e-16 Identities = 201/291 (69%), Gaps = 13/291 (4%) Strand=Plus/Plus Query 653586 TGGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGATCGTCACCCGCGCCATGCGCC 653645 || |||||| |||| |||| ||| ||| ||||||| ||| | ||||| Sbjct 3446 TGCTGACGCTCAACAGCGAGGGCTACAAGTTCTGCAAGATCCGTGTGCGCTCGGTGCGCA 3505 Query 653646 AGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG----- 653700 || || | |||||||| | |||| |||||||| || || || || ||| | Sbjct 3506 TACCGCAGATCGGCGACAAGTTTGCGTCACGCCACGGACAGAAAGGTAC-GTGCGGTATA 3564 Query 653701 CAGCGTGCGCTCGACCGAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGACAT 653760 ||| | ||| | ||||| ||||||| || | | ||| |||| ||||| ||||| Sbjct 3565 CAGTAT-CGCCAG---GAGGACATGCCGT--TCAC-GTGCGAGGGCATTACGCCGGACAT 3617 Query 653761 CGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCCCT 653820 ||||||||||||||||||||||||| || |||||||| || | |||| ||| | | Sbjct 3618 TATCATCAACCCGCACGCCATCCCGTCCCGTATGACCATTGGGCATTTGATCGAGTGCAT 3677 Query 653821 CCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTT 653871 || ||||||| ||| || | ||||| | | ||||||| ||| ||||| Sbjct 3678 CCAGGGCAAGCTGGGCTCGAACAAGGGCGAAATCGGCGACGCCACGCCGTT 3728 >seq8504 Length=8995 Score = 102 bits (112), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || || ||||| | ||| ||||||| ||||| ||||| || ||||| || Sbjct 1730 CTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGA 1671 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| || || | | ||| | ||| ||||| | |||| || | || Sbjct 1670 AATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCC 1611 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| ||||||| || || || || || |||| |||||||| |||||||||||||| Sbjct 1610 GATGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 1551 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGA 2073758 || || | |||| |||||| ||||| ||||| Sbjct 1550 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGA 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914094549005531