Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq8412 152 3e-32 seq2002 127 1e-24 seq5706 89.7 3e-13 >seq8412 Length=7683 Score = 152 bits (168), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| |||| ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 3998 CAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 3939 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || ||||| ||| |||| | ||||||||||| Sbjct 3938 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 3879 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || || |||||| |||| ||| ||| Sbjct 3878 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 3821 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| || || ||||||||||| Sbjct 3820 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3786 >seq2002 Length=20453 Score = 127 bits (140), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| |||| ||| |||||||||||||| ||||| || || |||| |||| Sbjct 18664 CAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATC 18605 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || ||||| ||| | || | || |||||||| Sbjct 18604 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTC 18545 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || ||| || || || || |||| || | |||||| |||| || ||| Sbjct 18544 CTGGATCTTTGCCTTCAC--ATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 18487 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || ||||| || || || || ||||||||| Sbjct 18486 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 18451 >seq5706 Length=17240 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34747 ATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTC 34806 |||||| || | || | || ||||| |||| |||| ||||||||| ||||||||||| Sbjct 99 ATTTCCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTC 40 Query 34807 CGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||| |||| |||| ||||| ||||||||||| || Sbjct 39 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325612503391751