Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq15932 127 2e-23 seq1160 86.0 5e-11 >seq15932 Length=2626 Score = 127 bits (140), Expect = 2e-23 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 637123 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 637182 || ||||||| ||| || || || | || |||||||||||| | || |||||| | || Sbjct 863 ATAGTCGATTTTTCCTCGCCTAACGTAGCGAAAGAAATGCATGTCGGTCATTTACGTTCG 922 Query 637183 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGTTTATCG 637241 || || |||||||| || |||||| | | || ||| || | ||||||||||| ||| Sbjct 923 ACCATCATTGGTGATTCAATTTGTCGATTTTTGGAATATCT-CGGACACGATGTGCTTCG 981 Query 637242 TATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 |||||| ||| | || || |||||||| ||||| ||||||||||||||| || Sbjct 982 TATTAACCATATCGGAGACTGGGGAACGCAATTTGGTATGTTAATTGCTCAT 1033 >seq1160 Length=33927 Score = 86.0 bits (94), Expect = 5e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 ||||||| || ||| | ||||| | ||| | || | ||||| ||||||||||||| | Sbjct 19515 CAAAAATGGTGTTGTTGGGATTCATCGCAACCTGGTTCTTGGCAGCATCTCCAATCAAAC 19574 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 |||| | || || |||| || || || || || || || || || ||||| ||||| | Sbjct 19575 GTTCCGAATCAGTGAATGCCACGTACGACGGGGTGGTTCGGTTGCCCTGATCGTTCGCGA 19634 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 |||| || || || |||| || | ||||| || || | || || || | ||| | Sbjct 19635 TAATGTCCACCTTGCCATGCTGGAACACACCGACGCACGAGTAGGTAGTGCCAAGATCTA 19694 Query 282870 TACCAATAGC 282879 |||| | ||| Sbjct 19695 TACCGACAGC 19704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739637241587754