Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_023734.1 Length=35725 Score E Sequences producing significant alignments: (Bits) Value seq17454 246 7e-61 >seq17454 Length=1869 Score = 246 bits (272), Expect = 7e-61 Identities = 465/681 (68%), Gaps = 16/681 (2%) Strand=Plus/Minus Query 12296 ATGATTTGGCGGTCCATCGTTCCAGAGTTACTTGAGAATGAGTTGCTAAGAATTACAGAT 12355 || || ||||| || ||| |||||||||| | ||||| | | || | ||||| ||| Sbjct 667 ATTATGTGGCGCTCGATCATTCCAGAGTTGTTAAAGAATAAAGTACTTCGTATTACTGAT 608 Query 12356 ATGCACAACGTCGAAGTGTTTTGTATGGCGTATGACACTTATCGCCAAAGCCAGAAAGAG 12415 ||||| ||||| |||| || ||||| || ||| ||| | || | || || || Sbjct 607 ATGCATAACGTTGAAGGCTTCTGTATTGCTTATCACAACTGGCGTTCAGCTCAAAAGGAA 548 Query 12416 CTTGCGAAAGAAGGTGTTACCGTTATGGGTGCGTCAGGCAGCCCAATTAAAAATCCAGCA 12475 | || | || |||| | | || ||| || ||||||||||| ||| Sbjct 547 GTCGCTATGTTCGGAATTACAATGACAACTGATCAAGGTAGTATTATTAAAAATCCTGCA 488 Query 12476 TTGACCGCACTCAACGAGGCAGCAAGACAGATGGCAACTTTTGGTAGCTTACTAGGATTA 12535 || || | || || || ||| ||| ||||||| |||||||| | | || || Sbjct 487 TTAACTGTGCTGAATGAAGCATCAAAACAGATGATTTCTTTTGGTTCAATGTTGGGTTTG 428 Query 12536 GATCCTTCATCTCGTCAACGCTTAACGGGTGCGGGTGATAAAAATCAAACCAACCCATTT 12595 ||||| |||||||| || || || |||| || ||| || || || ||| Sbjct 427 GATCCGTCATCTCGCAGCCGTTTGACTGGTGGAAATGGCAAACCAAAAGATAATCCGTTT 368 Query 12596 GCAGGTGTTCTGAATATGTGATGAATGCTCAAGCGAGATAAATATGGTCGATTATCCCAA 12655 ||| || |||||||||||| |||| | | ||| | || || || Sbjct 367 GCAAAGGTACTGAATATGTGA------------CGAGGCAGAAATGACAGCTTTCCCTAA 320 Query 12656 TGTTGATATCGCCAATAAGTGGGCAAGAGCAG-TCGTCAAAGGAAAAATACCAGCATGCA 12714 ||||| || || || |||||||||| ||||| | || |||||||| || |||| | Sbjct 319 CGTTGACATAGCAAACAAGTGGGCAA-AGCAGGTTGTTTCTGGAAAAATCCCGTCATGTA 261 Query 12715 AATGGGTGATTTTGGCTTGCCAACGTCACCTAGATGACTTAAAAGCAT-CaaaaaaaCGT 12773 ||||||| | | ||||| || || || || ||||||||| ||| ||||||| Sbjct 260 AATGGGTAAAACTAGCTTGTCAGCGCCATTTAAATGACTTAATT-CATGCAAAAAAGAAA 202 Query 12774 GACTATCCATACAAATTTGACCCAAAAGCTGCTGAAAAGAAGATACTTTTTGTTGAATTG 12833 || | |||||| |||||||| |||||| |||||||||||||| |||| | |||||| Sbjct 201 GAATTTCCATATAAATTTGAGCCAAAATTAGCTGAAAAGAAGATCGCTTTTATCGAATTG 142 Query 12834 CTGCCACATACCAAAGGTGAGTGGGCATTAAAGCGCTTAAAAATTCAGCTTGAACCTTGG 12893 || || |||||||| |||||||||||| | ||||| | ||||| ||| || |||||| Sbjct 141 CTACCTCATACCAAGGGTGAGTGGGCAATGAAGCGAATGAAAATCTCGCTGGAGCCTTGG 82 Query 12894 CAAAAATTTGGTATTGCGGTCACGTTCGGTTGGATGCGTAAAAAAGATGGCTTCCGCCGC 12953 ||||||||||| ||||| ||| || || |||| ||| ||||||||||| | || ||| Sbjct 81 CAAAAATTTGGAATTGCTTGCACATTTGGGTGGACGCGAAAAAAAGATGGTTATCGTCGC 22 Query 12954 TTTCGTGAGTCCTATTGGGAA 12974 || | ||| ||||||||| Sbjct 21 TTCAGAGAGAGTTATTGGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114170967331726