Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4818 98.7 2e-15 >seq4818 Length=14046 Score = 98.7 bits (108), Expect = 2e-15 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || || | ||| |||| |||||| ||| ||||| | | || | |||||| ||| Sbjct 10266 CTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAG 10207 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 || || || ||||| | || | || ||||||||||| |||||||| || || ||||| Sbjct 10206 GAGGGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACG 10147 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || || || || ||||| | |||||| ||||| || ||| || || Sbjct 10146 AAAACGCCCGAGGAAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGA 10088 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT-A 183232 || ||||| ||||| ||||| ||||| |||||||| || || | |||||| | Sbjct 10087 TGGGCGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCA 10028 Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 | || ||||| || | || ||||| || || | || ||||| ||||| Sbjct 10027 GGGC-TGGAAGGAGCGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGA 9977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903182761185440