Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17]
20,229 sequences; 224,162,116 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq8504 471 4e-128
seq2002 140 3e-28
seq8412 123 2e-23
seq6779 113 4e-20
>seq8504
Length=8995
Score = 471 bits (522), Expect = 4e-128
Identities = 1023/1517 (67%), Gaps = 24/1517 (2%)
Strand=Plus/Minus
Query 148251 AGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTC 148310
|||| || ||||||||||| |||||||| | |||||||||| || ||||| |
Sbjct 2788 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 2729
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
|| |||| || ||||| || |||||||| | ||| || || || | ||||| |||||
Sbjct 2728 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 2669
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|| | ||||||||| ||||| | ||| | || || || ||||| | |||
Sbjct 2668 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 2609
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||| ||| || || |||| | ||||||||| ||||||||||||||||| |||
Sbjct 2608 CAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTC 2549
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
| |||||||||||||||| |||||| || | || ||||| || ||||||||
Sbjct 2548 ACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCT 2489
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| || ||||||||||| || || ||| |||||| || ||| ||| |||
Sbjct 2488 TCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCG 2429
Query 148611 CTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCC 148669
||||||||||| ||| |||| | | | ||||| ||||| | |||||| ||||| | |||
Sbjct 2428 CTTTCGTACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCC 2370
Query 148670 AATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGT 148728
|| || | ||| || |||||| | || ||| | | ||||||| ||| |
Sbjct 2369 GATCGGTCTGTGGCGCATATTGGAGCGCTTAGC-CTCCGGCACGGGATAGTAATTGACAT 2311
Query 148729 CGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAAT 148788
| ||||| |||| ||||||||| ||| ||| | | | |||| | |||| |
Sbjct 2310 CAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGT 2251
Query 148789 CGTAC---TTGTC---ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACA 148842
| ||| ||||| | ||| | ||| ||||| |||||| ||||| |||||||| |
Sbjct 2250 CATACGTTTTGTCTTGCTTTAC-AAACAT--GTTCAAGGCGATCGAGGCCAGATTGCATA 2194
Query 148843 CGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGA 148902
| || ||||||| | |||||| || ||||| | |||||| ||| |||||||
Sbjct 2193 CCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGA 2134
Query 148903 TCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACG 148962
| ||| | |||| || || || || | ||||| || |||||||||||||||||||
Sbjct 2133 TGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACG 2074
Query 148963 GTCCGCCAGTTTCCACCTGCGTTTCCACTAT--GAACCGATGCAGGTCCTGCGCGCGCAC 149020
|| |||| ||||||||||||| ||| | || || | | ||| |||||||| |||
Sbjct 2073 GTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCA--CAGATCCTGCGCCTTCAC 2016
Query 149021 TTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCC 149080
||| || |||||||||| | |||||| || |||||| ||||||| | |||||
Sbjct 2015 CTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC 1956
Query 149081 GTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGC 149140
|| || || ||||| || | |||||||||||| || ||||| ||| |||
Sbjct 1955 CCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGC 1896
Query 149141 GTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 149200
| ||| |||| ||| ||||| || || | |||||| ||||| | | ||| || ||
Sbjct 1895 CTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCG 1836
Query 149201 GCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCA 149260
| || || ||| |||| ||| | ||| | |||||| || | |||||
Sbjct 1835 GACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCA 1776
Query 149261 CGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCG 149317
|||||||| || | |||| || || ||| ||||| ||||| ||||||| ||
Sbjct 1775 CGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCG 1716
Query 149318 CACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGA 149377
|| | ||||| | || || | ||| || | | || | | | | ||||| |||
Sbjct 1715 TGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACC 1656
Query 149378 GCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTA 149437
| ||| | || ||| || | ||||||||| | |||||||| ||| | |
Sbjct 1655 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1596
Query 149438 CTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTT 149497
|| || || || || | ||||| |||||||||||| ||||| ||
Sbjct 1595 TTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGA 1536
Query 149498 CATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGT 149557
|||||||| ||| ||||| || | | || ||| |||| | || || ||||||||
Sbjct 1535 CATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACATGGT 1476
Query 149558 GGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTC 149617
|| |||||| || || || || | || || | ||| | ||||| | | ||
Sbjct 1475 TGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATC 1416
Query 149618 CATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGC 149677
||||| |||||||||||||| ||||| |||||||||||||| ||||| || ||||| |
Sbjct 1415 GATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGAC 1356
Query 149678 CACTTTGTTTCC--AATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTAC 149735
| || || || || || |||||||| ||| | || || |||| || ||
Sbjct 1355 GA--TTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAG 1298
Query 149736 TTGTAGTCAAAGTCGCG 149752
||||| | ||||||||
Sbjct 1297 TTGTACCCGAAGTCGCG 1281
>seq2002
Length=20453
Score = 140 bits (154), Expect = 3e-28
Identities = 156/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| || || ||||| || ||||| ||| | ||| ||| | ||||| ||||
Sbjct 18655 ATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCA-TCCTCCAGCT 18597
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || |||||||| || || || |||||||||||||| |||||
Sbjct 18596 GCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCT 18537
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||| | | ||| | |||||| | ||||| || || | |||| ||| |||||||
Sbjct 18536 TTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGG 18477
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
| || ||||| |||||||||||||||
Sbjct 18476 TGAGTGTTTTCACGAAAATCTGCATG 18451
>seq8412
Length=7683
Score = 123 bits (136), Expect = 2e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| ||| || |||| | | | ||||| ||||
Sbjct 3989 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA-TCCTCCAGCT 3931
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || |||||||| || || ||||| || |||||||| |||||
Sbjct 3930 GCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCT 3871
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || |
Sbjct 3870 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 3811
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| ||||| ||||||||
Sbjct 3810 TGAGGGTTTTGACGAAGATCTGCAT 3786
>seq6779
Length=15061
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698
|||||| |||||||| |||||| || ||||||||||| ||||||||||| || ||
Sbjct 3220 CAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGT 3161
Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758
|| || ||||| | ||| | |||| | |||| || ||||| ||||| || ||
Sbjct 3160 GAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTACCGCTGAA 3101
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818
||| | ||||| || || || || || | |||||| | || | ||| |||||||
Sbjct 3100 GAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGCCTTCTTGCT 3041
Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865
|||||| |||| ||||| || ||||| | |||||||||||
Sbjct 3040 CGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCTCTTCACGCACGGCA 2994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483298561007960
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