Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq8504 349 3e-91 seq8412 93.3 4e-14 seq2002 93.3 4e-14 seq6779 87.8 2e-12 >seq8504 Length=8995 Score = 349 bits (386), Expect = 3e-91 Identities = 1009/1535 (66%), Gaps = 32/1535 (2%) Strand=Plus/Minus Query 146890 TGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAA 146949 || || ||||| || |||||||||| |||||| || || || || || ||| | Sbjct 2782 TGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTAC 2723 Query 146950 GGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCC 147009 ||||| || || ||||| ||||| | ||||| ||||||| || || ||||| ||| Sbjct 2722 GGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCC 2663 Query 147010 ACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCC 147069 | || || ||||| || | |||| | ||| || |||||||| ||||| | Sbjct 2662 AACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTC 2603 Query 147070 CACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 |||| || || | ||||||||| |||||||| || | || || | || Sbjct 2602 CACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGG 2543 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||||| || |||| ||| || || || |||| |||||||| || || || Sbjct 2542 CTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGT 2483 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || || ||||| ||||||||| ||||| | ||||| || |||||||| ||| Sbjct 2482 GCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCG 2423 Query 147250 TAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 || || ||| |||| || | || |||||||||| ||||| | |||| |||||| || Sbjct 2422 TACGG-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGG 2364 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAAT 147368 || || ||| |||||| || || | |||||||| ||| |||||| || Sbjct 2363 TCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGAT 2304 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 ||||| || || ||| || |||| | | || || || | || ||||| || Sbjct 2303 TTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT 2244 Query 147429 CCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487 ||||| | || || || ||||| |||||| || ||||||||||| || || Sbjct 2243 TTTGTCTTGCTTTACAAAC--AT--GTTCAAGGCGATCGAGGCCAGATTGCATACCGCTA 2188 Query 147488 TCTCTTCGG-CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACT 147546 ||| || || || ||||| ||| || || | |||||||||| ||||| ||| Sbjct 2187 CCTCATCCTTCGACGA-GTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTG 2129 Query 147547 CCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 147606 || | ||| ||||| || ||||| |||||||| || || ||| | |||||||||||| || Sbjct 2128 CCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACG 2069 Query 147607 CCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGC 147663 ||||| || || |||| ||| | ||| ||||| ||| |||||||| |||| || Sbjct 2068 CCGGTTTCCACCTGCGATTCGATGATCGCAAACC---ACAGATCCTGCGCCTTCACCTGC 2012 Query 147664 TGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAG 147723 || | |||| ||||| || ||||||| | ||||| | ||| ||||| ||||| || Sbjct 2011 CGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAG 1952 Query 147724 CAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTA 147783 || | || |||||||| | ||||| |||||||| |||||| |||| ||| | Sbjct 1951 GTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCC 1892 Query 147784 ACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA 147843 || || |||| ||||| ||||| | ||| || ||||| | | || || || | Sbjct 1891 ACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACC 1832 Query 147844 TCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-CACGCTATAGATGTCGGCGTGCCAGGG 147902 ||||| ||| |||| |||| || || || | | | || ||| | ||||| || Sbjct 1831 TCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGA-ATATATCGCCATGCCACGG 1773 Query 147903 TTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCAC 147959 |||| |||| ||| | || || ||| || || ||||| ||||| | || | Sbjct 1772 CTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGC 1713 Query 147960 CATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT---GGA 148016 | | ||||| | ||||||| ||| || |||| ||| ||| | | ||||| || ||| Sbjct 1712 CGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGA 1653 Query 148017 ATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTA 148076 ||| | | || || || | ||||||||| | || ||||| ||| | | Sbjct 1652 ---GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1596 Query 148077 CTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTT 148136 || || || ||| || | || || ||||||||| || ||||| || || Sbjct 1595 TTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATC--TTCG 1538 Query 148137 GAC---GCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 ||| | ||| || || || || | | || ||| | |||| |||| | || | Sbjct 1537 GACATGGTCAA-CAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCAAACAT 1479 Query 148194 GGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTC 148253 ||| || ||||| || || | | || || || ||||| || || | Sbjct 1478 GGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGC 1419 Query 148254 TTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 |||||||| ||||| || ||||| | || |||||||| ||||||||||| || || || Sbjct 1418 ATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGGGGCGCTC 1359 Query 148314 GGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTA 148373 | | | || |||||||| || | ||| ||| | |||||| | || || || Sbjct 1358 GACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATA 1299 Query 148374 CTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||| | || || | |||||| ||||||| Sbjct 1298 GTTGTACCCGAAGTCGCGATCGTAAATAATGGCCG 1264 >seq8412 Length=7683 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| ||| | | | ||||| || || |||||||||||| || || Sbjct 4006 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 3947 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || ||||| || |||| |||| |||||||| |||||||| || || || Sbjct 3946 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCC 3887 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || |||| | || | ||||| | ||||| || || | Sbjct 3886 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 3827 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || || ||||| | ||| |||||||| Sbjct 3826 GTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3786 >seq2002 Length=20453 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| ||| | | | || || || ||||||||||||||| | || || | Sbjct 18666 CGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCA 18607 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| |||| |||||||| |||||||| || |||||||| || Sbjct 18606 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTTG 18547 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| |||| | || | || || | ||||| || || | || | Sbjct 18546 TCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 18487 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || ||||| | ||||||||||||| Sbjct 18486 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATG 18451 >seq6779 Length=15061 Score = 87.8 bits (96), Expect = 2e-12 Identities = 261/397 (66%), Gaps = 7/397 (2%) Strand=Plus/Plus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835 ||||| | ||||| |||| |||||| |||| ||| |||| | | |||||| | Sbjct 3011 AAGGCGGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTC 3070 Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895 ||||||||||| || || || | || || || || || ||||| || || | Sbjct 3071 GTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGG 3130 Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955 | || | ||| | |||||||| || || ||| |||||| |||||||||||||| Sbjct 3131 CTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGAC 3190 Query 46956 GAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTA 47015 ||||| || ||| |||||||| || || | |||| | ||| | || | Sbjct 3191 GAAGGGCTGCACTGCGACTTTGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCG 3250 Query 47016 AACTCGGA-CACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTT 47074 || ||| | || | ||| || | | || ||||| ||||| ||||||| | Sbjct 3251 AA---GGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCT 3306 Query 47075 TACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATA 47133 || ||| ||||| || | |||| ||||||||| | ||| |||| | || | Sbjct 3307 GACGAAGGCACTGCCGGTGGATATGCTTGGCATGAACTGTGA-TCTGATGTCGCAGTACA 3365 Query 47134 TTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 47170 ||||||||||||| |||||| || || | |||| || Sbjct 3366 TTGAGTTTGTGGCCGATCGTTTGCTGCTCGAGCTGGG 3402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476490682900440