Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq8504 302 5e-77 seq2002 138 1e-27 seq8412 104 2e-17 >seq8504 Length=8995 Score = 302 bits (334), Expect = 5e-77 Identities = 1205/1874 (64%), Gaps = 56/1874 (3%) Strand=Plus/Plus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| ||||| | || ||| ||||| | | | ||||| || || |||||| Sbjct 1276 ACGATCGCGACTTCGGGTACAACTATTTCGGCTTTAAAACCTTGGAACGATCATACTTGC 1335 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 |||| ||||| || || || || || || ||||||||| ||||||| || | | Sbjct 1336 TGAAGATCAAGGGAAAAATCGTCGAGCGCCCCCAGCACATGCTGATGCGCGTTGCCATTG 1395 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651 |||| || ||||| ||||| || || || | || || ||| | || |||| | Sbjct 1396 GCATCCATGGCGAGGACATCGATGCAGCGATCGAGACCTACAATCTGCTGTCCGAGCGTT 1455 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCG-CCTCAATTGTCC 7710 | || || ||||| ||||| ||||||||||| |||| || | ||| || || | || Sbjct 1456 ACTTCACCCACGCCTCGCCAACCATGTTTGCTGCGGCTACGCA-GCGTCCCCAGCTTTCG 1514 Query 7711 TCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGC 7770 || || || || | |||||| |||||| ||||| || ||||| ||| |||||||| Sbjct 1515 TCCTGCTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATCTACGACACGCTGAAG 1574 Query 7771 GATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830 | || || ||||| |||| | ||| || || || |||||||| || | ||| Sbjct 1575 CAGTGTGCTCTAATTTCGAAATCGGCCGGTGGCATCGGACTGAACGTGCACTGTATCCGC 1634 Query 7831 GCCAACGGTAGCCGCATCGTGTCC---ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 || || || | |||| ||| || ||||| | | | |||| | | ||| ||| Sbjct 1635 GCGAAGGGAACGTACATC---TCCGGTACGAACGGGATTTCGAACGGTCTGGTGCCGATG 1691 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGGC 7944 ||||||| | ||| || ||| || | || || ||||| || || ||| || Sbjct 1692 CTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGGCCCGGA 1751 Query 7945 GCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGT 8004 || ||||||||| | ||||||||||| | || || | || | || ||||| Sbjct 1752 GCATTCGCCATCTATCTTGAGCCGTGGCATGGCGATATATTCGAGTTTCTCGATCTGAAG 1811 Query 8005 CGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCC 8064 |||| || || || | || || || | || | || | | ||| | || Sbjct 1812 AAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGGATACCG 1871 Query 8065 GATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCC---CGAT 8121 || ||||| ||| ||| || | ||| | ||| || |||||||| |||| Sbjct 1872 GACCTGTTCATGCAGCGTGTGGAGGCGAACGAAATGTGGAGCCTGATGTGCCCGCACGAT 1931 Query 8122 CGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATAC 8181 || | ||| | | | | || | | || || | |||||| ||| Sbjct 1932 TGTCCCGGGCTATCGGACACC---TGGGGCGAAGAGTTCGAGAAGCTGTACACGGGGTAC 1988 Query 8182 GAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTAT 8240 || | || || ||| | ||||||| ||||| |||| || ||| || || || Sbjct 1989 GAGAAAGAGGGTCGCTTTA-TGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGATCAT 2047 Query 8241 CGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAA 8300 ||||| || |||||||| | ||||||||||||||||| || |||||||| || Sbjct 2048 CGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTAA 2107 Query 8301 AAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACA 8360 ||| || || || | |||||||| || ||| |||||| |||| ||||| | Sbjct 2108 AAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACCTGTGCACTGAGATTGTGGA 2167 Query 8361 GTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTT 8420 |||| || || || || || || |||||||| || ||| | || ||| ||| Sbjct 2168 GTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTTGAACATGTT 2227 Query 8421 CGTTGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCA---AGT 8477 || | | | | || || || ||||||| | | |||| | | || | ||| Sbjct 2228 TGTAAAGCAAGAC---AAAACGTATGACTTTGCAAAGCTGAAGGAAGTCGCTAAGACAGT 2284 Query 8478 GACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGC--- 8534 |||| |||||| | | |||||||||||||||| |||||| || || || Sbjct 2285 GACG---CGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGAGGCTAA 2341 Query 8535 GCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGC 8594 |||| || || |||||||||||||| | ||| | |||||||| || ||||||| || Sbjct 2342 GCGC---TCCAATATGCGCCACAGACCGATCGGCATCGGCGTGCAGGGCATGGCCGATGC 2398 Query 8595 GTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAAT 8654 ||| | || ||||| || ||||||||| |||| || | | ||| || |||| Sbjct 2399 GTTCATCCTGATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCAGCAAAT 2458 Query 8655 AGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCC---CGAGAATT 8711 | ||||| | || ||||||||| | ||||| |||||| | || ||| ||||| | Sbjct 2459 ATTCGAAACCATCTACTACGGCGCACTGGAAGCGAGCTGTGAGCTGGCCGCTCGAGA--T 2516 Query 8712 GGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACAT 8771 || | ||||||| |||||| ||||||||| | ||| || || |||| ||||| || Sbjct 2517 GGTC-CGTACGAGACGTACGAGGGCAGCCCGGTGAGCAAGGGCATTCTGCAGTACGAGAT 2575 Query 8772 GTGGAATGTCACG---CCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGC 8828 |||||| || | || || | ||||||| ||| ||| ||||| || || || Sbjct 2576 GTGGAA---CAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGATCGC 2632 Query 8829 TCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCA 8888 | ||| | |||||||||||| || |||| ||||| || || | || || || Sbjct 2633 CAAGCACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACA 2692 Query 8889 AATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGT 8948 ||| | || ||||| ||||| || ||||||| ||| ||||| ||| || || || Sbjct 2693 AATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAATAGGCGCGT 2752 Query 8949 GTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGG 9008 | || | ||||| || || |||| | |||| | ||| || |||| | | ||| Sbjct 2753 GCTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGACCAACATGGG 2812 Query 9009 CGTTTACGA---CGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCG-TTCAGA 9064 | | || ||||| | | ||| || || ||| || | || | || | Sbjct 2813 TCTGTGGGATCTCGACATGAAGAACGA---AATTCTGTCCAACAATGG-ATCGATCCAAA 2868 Query 9065 ACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGC 9124 | || | || | || || | ||| || ||||| ||||| || ||||| || | Sbjct 2869 AGATAGCGGCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGGAGATCTCGG 2928 Query 9125 AAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTT 9184 | ||| ||| ||||| || ||| | ||||| ||||| |||||| ||||| | Sbjct 2929 TGAAAACGTGCATCAAAATGGCCGCAGATCGTGGCGCGTTTATCGATCAGTCGCAATCGT 2988 Query 9185 TTAACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTT 9244 | ||| | ||| || | |||| || | | || | || |||| | | Sbjct 2989 TCAACATTCACGTCGCGGAGCCAAACTATGGCAAGCTGACGTCGATCCATTTCTACGGCT 3048 Query 9245 GGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAA-CCT 9303 |||| ||||| || ||||| |||||||||||| |||| || || || |||| |||| | Sbjct 3049 GGAAGATGGGGTTGAAAACTGGCATGTACTATCTGCGTACCAAGCCGGCCG-TGAATGCA 3107 Query 9304 ATCAAATTTACAGT 9317 ||| | ||||| || Sbjct 3108 ATCCAGTTTACGGT 3121 >seq2002 Length=20453 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | |||||||| ||| || || || || |||||||| |||||||||||||| Sbjct 18682 CTTACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTC 18623 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | ||| || || || ||||| ||||| || || |||| |||||||||||| || Sbjct 18622 GGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 18563 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || |||||||| || || || || ||| || || || | ||||| || | || Sbjct 18562 GGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTC 18503 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || ||||| || ||||| | ||||| |||||||| ||||| || Sbjct 18502 GACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 18449 >seq8412 Length=7683 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| || || || || || ||||| || |||||||||||| | ||| | Sbjct 4003 AGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 3944 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||||||| ||||| || || || Sbjct 3943 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCC 3884 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || | || || || || ||| Sbjct 3883 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 3824 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| ||||| || | ||||| ||||| || ||||| ||| Sbjct 3823 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 3782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505270603697080