Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8504 370 1e-97 >seq8504 Length=8995 Score = 370 bits (410), Expect = 1e-97 Identities = 1193/1837 (65%), Gaps = 22/1837 (1%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| ||||||||||| || ||||||| || | |||| ||||||||| Sbjct 3097 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 3038 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| || || | ||||| || | |||||| Sbjct 3037 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 2978 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || || || | |||||| |||||||| || || ||| || || || Sbjct 2977 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 2919 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGA 68630 ||| | || || | | | || || | || | || | ||||| || || Sbjct 2918 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGA 2859 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 |||| | ||| | |||| ||||| || || || ||||| | | || || Sbjct 2858 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 2799 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || | ||| | | | |||| Sbjct 2798 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 2739 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | |||||||| || || |||||||| || || || || Sbjct 2738 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 2679 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || | ||| | || || || | ||| || || || Sbjct 2678 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 2619 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | ||| | ||| ||||| | ||| | ||||| | ||||| || ||||| Sbjct 2618 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 2559 Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990 || || || | || | || || || || || || || | | || || || Sbjct 2558 GCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC 2499 Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 ||| || || || | ||| ||||| || || |||||||| || | || ||| || | ||| Sbjct 2498 ACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTG 2439 Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 || ||| || ||| | ||||| | | || || || ||||| |||| ||||| || Sbjct 2438 AGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCAC 2379 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 || || ||||| ||||| || | | |||| || | | ||| || || | ||||| || Sbjct 2378 GCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTA 2319 Query 69171 ATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTT 69230 ||| | ||| || ||||| || ||||| || ||| ||| | || ||||| || || Sbjct 2318 ATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTT 2259 Query 69231 GAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGAT 69286 ||| ||| | | ||| || || ||||||| |||| || | || || |||| Sbjct 2258 TGCAAAGTCATACGTTTTGTCTTGCTTTA-CAAACATGTTCAAGGCGATCGAGGCCAGAT 2200 Query 69287 TACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 | || || |||||||||| | || | || | | ||||| || || || || Sbjct 2199 TGCATACCGCTACCTCATCCTTCGAC---GAGTACTCCACAATCTCAGTGCACAGGTTGG 2143 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 ||||||||| || || | ||| ||||| ||||| || || || || |||||||| | Sbjct 2142 AACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACA 2083 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA- 69462 | || |||| || ||||| | ||| |||||||| || | ||| | || ||| Sbjct 2082 GCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACA-GATCCTGC 2024 Query 69463 GCATTTAT-TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAA 69521 || || | | | | | | | || |||||| || || || || ||| ||||| Sbjct 2023 GCCTTCACCTGCCG-CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAA 1965 Query 69522 TTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACAC 69581 || || ||||| || | || ||||| || | || ||||||| ||||| Sbjct 1964 CTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACAT 1905 Query 69582 ATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641 || | ||| || || | ||| || || || || ||||| || || ||| | || Sbjct 1904 TTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTC 1845 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | | | || || || || || ||||| || |||||||||||||| | ||||| Sbjct 1844 CCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATC 1785 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 |||||| || || ||||| || || | |||| || || || || || |||||||| Sbjct 1784 GCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATC 1725 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | ||| | || || || || ||||| | ||||||||| | | ||| || || | || Sbjct 1724 GACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCC 1665 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTC 69880 || || || || || || |||| | ||||| ||| | | | | || || || | Sbjct 1664 GTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGATGC 1606 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || ||| ||| || ||||||||||| | |||| ||||| || || ||||| |||| Sbjct 1605 CACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGC 1546 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 |||| || |||| | | || || ||| || | || || | || ||||| Sbjct 1545 TATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAG 1486 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 ||| | || || || ||||| ||||| | || || ||||||||||| || || | Sbjct 1485 CAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGA 1426 Query 70061 TAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 | |||| || || ||| ||| || || || || || ||||||| ||| ||||| | Sbjct 1425 TCGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGGG 1366 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 | || || || |||| || || |||| || ||||||| ||||| |||||||| | Sbjct 1365 GGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGC 1306 Query 70181 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 | ||||||||||| ||||| | ||||||||||| Sbjct 1305 CGAAATAGTTGTACCCGAAGTCGCGATCGTAAATAAT 1269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686735106523560