Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq12085 111 1e-19 >seq12085 Length=6219 Score = 111 bits (122), Expect = 1e-19 Identities = 211/308 (69%), Gaps = 7/308 (2%) Strand=Plus/Minus Query 19223 GGAATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTA 19282 ||| | || |||| ||| ||||| || ||| | || ||| || || ||||| Sbjct 3052 GGATTTTGGAAGA-ATGGGCATTGGTGGGTTGGATCGTGAATTTAATGCGATATTTCGAC 2994 Query 19283 GAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATG 19342 | || |||| ||||||||||| | |||| || || ||||| ||||||||||||| | Sbjct 2993 GTGCTTTTGCTTCGCGTGTTTTCCCACCAGAGGTGGTTGAACAACTGGGATGTAAACACG 2934 Query 19343 TTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAAC 19402 | || || | || ||||| || || ||| ||| |||||| | || || || || Sbjct 2933 TAAAGGGCATTCTTCTATATGGACCTCCTGGTACTGGCAAAACACTTATGGCACGACAAA 2874 Query 19403 TTAGTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAA 19459 || | | | ||| | | | |||| || || ||||||||||| | || ||| Sbjct 2873 TTGGAACAATGTTAAATGCTCGAGAACCA---AAGATAGTAAATGGTCCGCAGATTTTAG 2817 Query 19460 ATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAG 19519 |||||||||| ||| |||| |||| ||||| || || | || ||||| || ||||| | Sbjct 2816 ATAAATATGTCGGTGAATCAGAAGCTAATGTGCGTCGACTATTCGCTGATGCCGAAGAGG 2757 Query 19520 AACAAAAA 19527 || ||||| Sbjct 2756 AAGAAAAA 2749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397358010825145