Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq8504 215 4e-51 >seq8504 Length=8995 Score = 215 bits (238), Expect = 4e-51 Identities = 1048/1644 (64%), Gaps = 41/1644 (2%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || || || || ||||| |||||||||||| |||| ||| |||||||| Sbjct 3127 TTGTCCACCGTAAACTGGATTGCATTCACGGCCGGCTTGGTACGCAGATAGTACATGCCA 3068 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523 ||||| | || || || || || ||||| || | ||| || || | Sbjct 3067 GTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGACGTCA--GCTTGCCATAGTTTG 3010 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 | | ||| ||| ||||||| ||||||||| ||||| ||||| ||||| | ||||| | Sbjct 3009 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 2950 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | || ||| | ||| | |||||||| | || ||||| || || | ||| Sbjct 2949 CCATTTTGATGCACGTTTTCACCGAG-ATCTCCCATACCGTTTTGTACAGGTCGCGAATT 2891 Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAA-CGCTACCGTTGTTGGCTATAATTTCGTTGCG 130701 | | ||||| ||| ||| ||| | || | || ||||||| | ||||||||| Sbjct 2890 TCCTGCGGTATAGCCGCTATCTTTTGGATCGAT-CCATTGTTGGACAGAATTTCGTTCTT 2832 Query 130702 CATACTTTTATCGTACA-ATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGA 130760 ||| ||| ||| | ||| | || ||| ||| | | | ||||| || | | Sbjct 2831 CATGTCGAGATCCCACAGACCCATGTTGGTCAA-ATCCTGCAGAAGATGATGGTTCACCA 2773 Query 130761 TTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGG 130820 || || || || | ||| ||||| ||| ||||| ||| |||| |||| || || | Sbjct 2772 CCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACG 2713 Query 130821 ATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAG 130880 |||| |||||||||| |||||||| || | || || ||||| |||| | || | Sbjct 2712 ATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCG 2653 Query 130881 AATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGG 130940 |||| |||| |||||| | | ||| ||| |||||| || |||| | ||| ||| | Sbjct 2652 AATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCG 2593 Query 130941 TAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATT 131000 | |||| | ||||||||||| || | || || ||||| || || | || ||| | Sbjct 2592 TCGGTT---CCTTGTTCCACATCTCGTACTGCAGAATGCCCTTGCTCACCGGGCTGCCCT 2536 Query 131001 CGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGT 131060 || ||| ||||| || || | ||||| || ||| ||||||| || |||| Sbjct 2535 CGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCTCGCTTCCAGTGCGCCGT 2476 Query 131061 AATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAA 131120 | || ||||||||| ||||| | ||||| | || || | | ||| ||||| ||| Sbjct 2475 AGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGAT 2416 Query 131121 ATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTT 131180 | ||| | || || || || || | ||||| | || | ||| | |||||| || Sbjct 2415 AGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATGCCGATCGGTCTGTGGC 2356 Query 131181 TTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTGT 131237 | ||| | ||| | | | ||| |||||| || | ||||| ||||||| Sbjct 2355 GCATATTGGA---GCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGT 2299 Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297 | | ||||||| || | | | ||| |||| || | || ||| |||| Sbjct 2298 TCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGT---TT 2242 Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357 | || | |||||||| || | || || |||||||| || || || || | Sbjct 2241 TGTCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCAT 2182 Query 131358 CATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415 | | ||| | |||| ||||| || | ||||| || | || |||||||| | Sbjct 2181 CCT--TCGACGAGTACTCCACAATCTCAGTGCACAGGTTGGAACATTTGATGGTGCCGAT 2124 Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATGGTCCTTGTACATCATGTAGGGCGTGCCCGT 131475 ||| || || || |||||| ||| | |||||||||| |||||| || ||| || Sbjct 2123 ATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGT 2064 Query 131476 TTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTG 131533 ||| || || | ||| || | | | || | || | | || || || | Sbjct 2063 TTCCACCTGCGATTCGATGA--TCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATA 2006 Query 131534 TATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTG 131593 | | || ||| ||||| ||||| | | || || | || ||| | | || Sbjct 2005 AAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC---CCAGGTG 1949 Query 131594 TCC---AAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACT 131650 ||| | |||||| ||| || ||||| || ||||| ||||| || || Sbjct 1948 TCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACA 1889 Query 131651 CGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCT 131710 |||| ||| |||| ||||| | ||| | ||||| |||| || | || ||| Sbjct 1888 CGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCC 1829 Query 131711 TCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCC 131770 || | || | |||| |||| || | ||| || || || || ||||||| || || Sbjct 1828 TCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGCCATGCCACGGCTCA 1769 Query 131771 AAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATG 131827 | ||| | || | ||| || ||| || || || |||| || | || || | Sbjct 1768 AGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTA 1709 Query 131828 TTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATG 131887 |||||||| ||||||| ||| ||| ||| |||||| | | || || || | ||| Sbjct 1708 TTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATG 1649 Query 131888 TAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAG 131947 || | || || || | ||| ||| ||||| ||||| || || ||| | |||| || Sbjct 1648 TACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGATTTCGAA 1589 Query 131948 ATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGG-CAATGTC 132006 ||||| || || | | || |||| ||||| || || | ||| || ||| || ||| Sbjct 1588 ATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTC 1529 Query 132007 GACTAAAAAGCAAGAGGACAACTG 132030 || | ||||| || || | ||| Sbjct 1528 AAC-AGGAAGCAGGACGAAAGCTG 1506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424829636274648