Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq8504 109 2e-18 >seq8504 Length=8995 Score = 109 bits (120), Expect = 2e-18 Identities = 275/410 (67%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || | |||||| ||| || ||||||||||| || ||| ||| || Sbjct 1686 CCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGG 1745 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| ||| ||||||| || ||||||||||| | ||| || |||| | Sbjct 1746 CCCGGAGCATTCGCCATCTATCTTGAGCCGTGGCATGGCGATATATTCGAGTTTCTCGAT 1805 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 ||| | || ||||||| |||||| | ||| || ||||| | ||| ||||| Sbjct 1806 CTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGG 1865 Query 255161 -TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGTGTC 255218 | | | || ||||| |||| || ||||| ||| |||| | |||||||| ||||| | Sbjct 1866 ATACCG-GACCTGTTCATGCAGCGTGTGGAGGCGA-ACGAAATGTGGAGCCTGATGTGCC 1923 Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGG 255278 | || | ||||| ||| ||| | ||||| || ||||| || || ||||| || Sbjct 1924 CGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACGG 1983 Query 255279 AGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGA 255338 ||||||| | || || || | || || ||| ||| || | | ||| ||| Sbjct 1984 GGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGA 2043 Query 255339 TGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA 255387 | | || || |||| |||||||||| | |||| | | || |||| || Sbjct 2044 TCAT-CGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGA 2092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587924328622905