Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8504 122 1e-22 >seq8504 Length=8995 Score = 122 bits (134), Expect = 1e-22 Identities = 452/703 (64%), Gaps = 13/703 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| | ||||| || || || ||||||| || || | |||||||| ||||| Sbjct 2741 GTAAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGA 2682 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| || || || |||| || | || ||| ||| Sbjct 2681 AGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTC 2622 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 ||| | | |||||| | || | | | |||| | |||| |||| || |||| Sbjct 2621 CTTCAACTCGGCCCAGTTCCACAGATCCG-TCGGTTCCTTGTTCC-ACATCTCGTACTGC 2564 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 || | || | | | | || ||||| | || || || | ||| | | ||| Sbjct 2563 AGAATGCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCC 2504 Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004 | ||||||||||| ||||| | ||| || |||||||| || || | ||| | | Sbjct 2503 AGCTCACAGCTCGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGC 2444 Query 111005 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCT 111064 | | || || || || | | ||||| || || || |||| || | || Sbjct 2443 TTTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCC 2384 Query 111065 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACG 111121 || || || | || || |||||||| |||||||| || ||| || ||| ||| Sbjct 2383 TGCACGCCGATGCCGATCGGTCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGCACG 2327 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 ||||| |||| ||||||| | ||| ||||| || || |||| | || ||| Sbjct 2326 GGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCC 2267 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 111241 | || ||| || | ||| | || | |||| || ||| || | | |||||| Sbjct 2266 TTCAGCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCGATC 2210 Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || |||| |||||| || || ||||||||| | |||||| | ||| || || || Sbjct 2209 GAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCAC 2150 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | |||||||| || || || || | ||||| |||||||| || ||||| |||||| Sbjct 2149 AGGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCC 2090 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404 ||||| |||||||| || || || ||| ||| |||| || Sbjct 2089 TTGTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGA 2047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627873194258400