Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6779 105 8e-18 seq8504 100 3e-16 seq3725 89.7 6e-13 >seq6779 Length=15061 Score = 105 bits (116), Expect = 8e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| |||| | ||||| | | | ||| ||||| ||||| |||| ||| | Sbjct 2981 GCCATCGAAACGCTGCCGTGCGTGAAGAGGAAGGCGGACTGGGCGCTGAACTGGATCTCG 3040 Query 94783 ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTC 94842 | ||| | ||||| ||||| || | ||||| || ||||||||||||||| Sbjct 3041 AGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTC 3100 Query 94843 TTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTC 94902 ||| ||| |||| ||| || | ||||| |||||||| || || ||||| || ||| Sbjct 3101 TTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTC 3160 Query 94903 TGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| |||||||| ||||| || ||||| || || ||| || ||||| Sbjct 3161 ACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 3213 >seq8504 Length=8995 Score = 100 bits (110), Expect = 3e-16 Identities = 857/1381 (62%), Gaps = 18/1381 (1%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| | |||||||| ||||| || || ||||| || ||||| ||| | | Sbjct 1364 CCCCCAGCACATGCTGATGCGCGTTGCCATTGGCATCCATGGCGAGGACATCGATGCAGC 1423 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| | | ||||| | || |||| ||||| | |||||| | || Sbjct 1424 GATCGAGACCTACAATCTGCTGTCCGAGCGTTACTTCACCCACGCCTCGCCAACCATGTT 1483 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| | ||| | | ||||| | || |||||||| | ||| || || Sbjct 1484 TGCTGCGGCTACGCAGCGTCCCCAGCTTTCGTCCTGCTTCCTGTTGACCATGTCCGAAGA 1543 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || | || ||||| | || || | | ||||||| | ||| || || | ||| || Sbjct 1544 TAGCATTGAGGGCATCTACGACACGCTGAAGCAGTGTGCTCTAATTTCGAAATCGGCCGG 1603 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || || || | || | | | || || | | || || || || Sbjct 1604 TGGCATCGGACTGAACGTGCACTGTATCCGCGCGAAGGGAACGTACATCTCCGGTACGAA 1663 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | ||| | | || ||||| ||||| | ||| || || || || || Sbjct 1664 CGGGATTTCGAACGGTCTGGTGCCGATGCTGCGCGTCTACAACAATACGGCACGGTACGT 1723 Query 104581 AAATCAAGCTGGGCGTCGAAAGG----GATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 |||| | ||| | | | || || | |||| ||||||||||||| ||||| | Sbjct 1724 CGATCAGGGTGG-CAACAAGCGGCCCGGAGCATTCGCCATCTATCTTGAGCCGTGGCATG 1782 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 ||||| | ||||| || || || ||| || | ||||||| || | Sbjct 1783 GCGATATATTCGAGTTTCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCAC 1842 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | || | || | ||| |||||||| || || || |||||| || | || |||| || | Sbjct 1843 GGGACATGTTTTACGCACTCTGGATACCGGACCTGTTCATGCAGCGTGTGGAGGCGAACG 1902 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 | ||| || | || || || | || || || || || || ||| || | Sbjct 1903 AAATGTGGAGCCTGATGTGCCCGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAG 1962 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGCCA 104875 |||| || || ||||| ||||||| |||| ||||| | |||| | |||| Sbjct 1963 AGTTCGAGAAGCTGTACACGGGGTACGAGAAAGAGGGTCGCTTTA-TGCGGCAGGTGAAG 2021 Query 104876 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935 || ||| ||||| || || || | || || || || || ||| |||||| Sbjct 2022 GCGCAGGATCTGTGGTTTGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATG 2081 Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995 || ||||| || || || || | || ||||| || ||||| | || ||||| || Sbjct 2082 CTGTACAAGGATGCTTGCAATCGTAAAAGTAACCAGCAGAATATCGGCACCATCAAATGT 2141 Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 105055 ||||| || || || || || |||| | | || |||||| || || || || Sbjct 2142 TCCAACCTGTGCACTGAGATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAAT 2201 Query 105056 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAA 105115 || || || ||||| | || || ||| | | ||||||| || | ||| | || | Sbjct 2202 CTGGCCTCGATCGCCTTGAACATGTTTGTAAAGC--AAGACAAA-ACGTATGACTTTGCA 2258 Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 || || | ||||| | || || || || || || |||| | | |||||| ||| Sbjct 2259 AAGCTGAAGGAAGTCGCTAAGACAGTGACGCGCAATCTGAACAAAATCATTGATGTCAAT 2318 Query 105176 TTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTC 105232 | || ||||| ||| || || || |||||| | ||| | || || || || Sbjct 2319 TACTATCCCGTGCCGGAGGCTAAGCG---CTCCAATATGCGCCACAGACCGATCGGCATC 2375 Query 105233 GGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAA 105292 || || ||||| | || |||| ||||| || ||| | | | || ||| || Sbjct 2376 GGCGTGCAGGGCATGGCCGATGCGTTCATCCTGATGCGCTATCCGTACGAAAGCGAAGAG 2435 Query 105293 GCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGT 105352 || | | | ||| || ||||| || ||||| || ||| ||| || || ||||| Sbjct 2436 GCTCAAAAGCTAAATCAGCAAATATTCGAAACCATCTACTACGGCGCACTGGAAGCGAGC 2495 Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412 | ||| |||| | |||||||| || || || | ||||| || | | ||| Sbjct 2496 TGTGAGCTGGCCGCTCGAGATGGTCCGTACGAGACGTACGAGGG-CAGCCCGGTGAGCAA 2554 Query 105413 GGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGC 105471 ||| | || || | || |||||| | || | | | || | |||||| | Sbjct 2555 GGGCATTCTGCAGTACGAGATGTGGAACAAGGAACCGACGGATCTGTGGAACTGGGCCGA 2614 Query 105472 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCC 105531 | |||||| ||| || | || |||| || || || |||| || ||||| Sbjct 2615 GTTGAAGGAAAAGATCGCCAAGCACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCC 2674 Query 105532 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 105591 || || ||||| |||||||| | || || ||||||| || || || |||||| |||| Sbjct 2675 GACGGCTTCCACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAA 2734 Query 105592 C 105592 | Sbjct 2735 C 2735 >seq3725 Length=17844 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 154106 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCG 154165 ||||| || || || ||||| || ||| | || |||||| | ||| | || || || Sbjct 16964 TATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGCC 16905 Query 154166 GGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCAC--GGAG 154223 ||||| || || |||||| |||| | ||| ||| || || ||||||||| |||| Sbjct 16904 GGTGTCGTCGACGAAGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCACTCGGAG 16845 Query 154224 ACAAAGACTTTGAGGTAAAGAGGGGTGAGCGCATCGCACA 154263 ||||| |||||| || |||| ||||| ||||||||||| Sbjct 16844 ACAAA--CTTTGAAGTTAAGAAAGGTGATCGCATCGCACA 16807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583113315215960