Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2002 168 2e-36 seq1530 89.7 2e-12 seq16830 87.8 5e-12 seq6203 87.8 5e-12 seq3216 87.8 5e-12 seq2385 87.8 5e-12 seq2212 87.8 5e-12 seq1900 87.8 5e-12 seq1033 87.8 5e-12 seq715 87.8 5e-12 seq178 87.8 5e-12 seq141 87.8 5e-12 seq18 87.8 5e-12 seq12914 86.0 2e-11 >seq2002 Length=20453 Score = 168 bits (186), Expect = 2e-36 Identities = 177/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||||||||| | || || || |||||||| || || || || ||||| || || Sbjct 18684 TACTTACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAG 18625 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || || || || ||||| ||||| |||||||| Sbjct 18624 TCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCT 18565 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || ||||| ||||| || ||||| || || || || ||||| || |||| || || || Sbjct 18564 GGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGC 18505 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||||||| | ||||| ||||| |||||||| || ||||||||||| Sbjct 18504 TCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18452 >seq1530 Length=29111 Score = 89.7 bits (98), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 8758 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 8699 Query 235950 CCCAGCATCTCCATACA 235966 ||| ||||||||| ||| Sbjct 8698 CCCGGCATCTCCAAACA 8682 >seq16830 Length=2316 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2316 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2257 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 2256 CCCGGCATCTCCA 2244 >seq6203 Length=14766 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 7245 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 7186 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 7185 CCCAGCATCTCCA 7173 >seq3216 Length=19595 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 13284 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 13225 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 13224 CCCGGCATCTCCA 13212 >seq2385 Length=32666 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 20678 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 20737 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 20738 CCCGGCATCTCCA 20750 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 23047 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 22988 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 22987 CCCGGCATCTCCA 22975 >seq2212 Length=23042 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 20329 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 20270 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 20269 CCCGGCATCTCCA 20257 >seq1900 Length=22357 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 21587 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 21646 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 21647 CCCGGCATCTCCA 21659 >seq1033 Length=29730 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 26575 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 26634 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 26635 CCCGGCATCTCCA 26647 >seq715 Length=31240 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 13157 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 13098 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 13097 CCCGGCATCTCCA 13085 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 15389 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 15330 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 15329 CCCGGCATCTCCA 15317 >seq178 Length=49310 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 22831 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 22890 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 22891 CCCGGCATCTCCA 22903 Score = 84.2 bits (92), Expect = 7e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||||| |||| | | Sbjct 9021 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGAGATCGATA 9080 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 9081 CCCGGCATCTCCAGAC 9096 >seq141 Length=59305 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 31778 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 31837 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 31838 CCCGGCATCTCCA 31850 >seq18 Length=105112 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 52507 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 52448 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 52447 CCCAGCATCTCCA 52435 >seq12914 Length=5887 Score = 86.0 bits (94), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 5860 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGATA 5801 Query 235950 CCCAGCATCTCCATA 235964 ||| ||||||||||| Sbjct 5800 CCCCGCATCTCCATA 5786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514861670208887