Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8504 318 6e-82 >seq8504 Length=8995 Score = 318 bits (352), Expect = 6e-82 Identities = 1124/1730 (65%), Gaps = 52/1730 (3%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTC----CCGCGAGTCCGCGAGACATA 19173 ||||| || || | |||||||||||||| ||| || | |||| |||||| || Sbjct 1380 ATGCGCGTTGCCATTGGCATCCATGGCGAGGACATCGATGCAGCGAT----CGAGACCTA 1435 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | | ||| || | || | |||||| ||||| |||| ||| | || || | ||| Sbjct 1436 CAATCTGCTGTCCGAGCGTTACTTCACCCACGCCTCGCCAACCATGTTTGCTGCGGCTAC 1495 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | | || ||| | ||| ||| ||||| || | ||| || || ||||||||||| Sbjct 1496 GCAGCGTCCCCAGCTTTCGTCCTGCTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGG 1555 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||||||| ||||| ||| |||| || | || || || | | |||| || ||||| | Sbjct 1556 CATCTACGACACGCTGAAGCAGTGTGCTCTAATTTCGAAATCGGCCGGTGGCATCGGACT 1615 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || ||| | |||||| ||| || || ||| || |||||||| | | Sbjct 1616 GAACGTGCACTG-TATCCGCGCGAAGGGAACGTACATCTCCGGTACGAACGGGATTTCGA 1674 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 ||||| | || || ||||| ||||||| |||||| ||||| |||||||| | ||||| | Sbjct 1675 ACGGTCTGGTGCCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTG 1734 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 || ||| || || | ||||||||||| || ||||| ||||| | || | | | Sbjct 1735 GCAACAAGCGGCCCGGAGCATTCGCCATCTATCTTGAGCCGTGGCATGGCGATATATTCG 1794 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | || ||||| ||| ||| || | |||||| | ||| || ||| | || Sbjct 1795 AGTTTCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTT 1854 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || | ||||| |||||||| |||||| || || ||| | ||||| ||| || Sbjct 1855 ACGCACTCTGGATACCGGACCTGTTCATGCAGCGTGTGGAGGCGAACGAAATGTGGAGCC 1914 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 |||||||||||||||| || || || ||| | ||| || ||||| | |||| | || Sbjct 1915 TGATGTGCCCGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGC 1974 Query 19713 TGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCT 19772 ||||| | |||| |||| || || | | | ||| ||| | ||| ||| Sbjct 1975 TGTACACGGGGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGA--TCT 2032 Query 19773 G-GGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA 19830 | || ||| || || || ||||| || |||||| |||||||||| |||||||| Sbjct 2033 GTGGTTTGCGATCATCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGA 2092 Query 19831 CGC-CGCGAACG-CCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTG 19888 || || | || |||| || ||| |||| |||||| | ||||| | ||||||||| Sbjct 2093 TGCTTGCAATCGTAAAAGT--AACCAGCAGAATATCGGCACCATCAAATGTTCCAACCTG 2150 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| || ||||| || | ||| ||| || || || |||||||| || Sbjct 2151 TGCACTGAGATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCG 2210 Query 19949 CTGTGCCTGCCGACTTTCGTCAAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGAG 20005 | | || | || || ||| | | | | |||||||| || || | || Sbjct 2211 ATCGCCTTGAACATGTTTGTAAAGCAAGACAAAACGTATGACTTTGCAAAGCTGAAGGAA 2270 Query 20006 GTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC---G 20062 || | | || ||||| |||||||| |||| ||| || | || || | Sbjct 2271 GTCGCTAAGACAGTGACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTG 2330 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | ||||| |||| || |||||||||||| | ||||||| |||||||| |||||| Sbjct 2331 CCGGAGGCTAAGCGC---TCCAATATGCGCCACAGACCGATCGGCATCGGCGTGCAGGGC 2387 Query 20123 CTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGCT 20181 ||||||| | ||||| || | || | | ||| | | | |||| | |||| Sbjct 2388 ATGGCCGATGCGTTCATCCTGATGCGCTATCCGTACGA-AAGCGAAGAGGCTCAAAAGCT 2446 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAACT 20238 || || || ||||| || | ||| ||| || |||||| || || || || Sbjct 2447 AAATCAGCAAATATTCGAAACCATCTACTACGGCGC---ACTGGAAGCGAGCTGTGAGCT 2503 Query 20239 CGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCT 20298 ||| || || ||||||||||||| | |||| || | | | |||| || || Sbjct 2504 GGCCGCTCGAGATGGTCCGTACGAGACGTACGAGGGCAGCCCGGTGAGCAAGGGCATTCT 2563 Query 20299 CCAGCCGGACATGTGGGGC--GTCACTGA-GAATGAGT---TTTGGAGCGCCCTCAAGGT 20352 ||| || |||||| | | || || | || || ||| || | |||| Sbjct 2564 GCAGTACGAGATGTGGAACAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGGA 2623 Query 20353 TGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTC 20412 ||||| | ||||| ||||||| ||| |||| | || || |||||||| || || Sbjct 2624 AAAGATCGCCAAGCACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTC 2683 Query 20413 GACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTT 20472 || || || || | || ||||| || | ||||||||||||||| | ||| | ||| Sbjct 2684 CACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAA 2743 Query 20473 GCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCA 20532 | || ||| | || |||||| |||| ||| | || || | | || ||| Sbjct 2744 TAGGCGCGTGCTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGAC 2803 Query 20533 GAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGGGAGC 20590 || || | | ||||| | | | || ||||| ||||| ||||| | ||| | Sbjct 2804 CAACATGGGTCTGTGGGATCTCGACATGAAGAACGAAATTCTGTCCAA---CAATGGATC 2860 Query 20591 G-TCC---AGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGA 20646 | ||| || | || ||| || ||| | | ||| | |||| || |||||||| Sbjct 2861 GATCCAAAAGATAGCGGCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGGA 2920 Query 20647 AATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTC 20706 ||| | ||| | |||| | ||||| || ||||| ||||| | ||||| ||||| Sbjct 2921 GATCTCGGTGAAAACGTGCATCAAAATGGCCGCAGATCGTGGCGCGTTTATCGATCAGTC 2980 Query 20707 CCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC-CTGGCGAAGCTGAGCTCCATGCATA 20765 || ||| |||| | | | | | | || | | |||| ||||||| || || ||| Sbjct 2981 GCAATCGTTCAACATTCACGTCGCGGAGCCAAACTATGGC-AAGCTGACGTCGATCCATT 3039 Query 20766 TGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | ||||||||| | | |||| | || || ||||||||||||||||| ||| Sbjct 3040 TCTACGGCTGGAAGATGGGGTTGAAAACTGGCATGTACTATCTGCGTACC 3089 Score = 284 bits (314), Expect = 1e-71 Identities = 1133/1753 (65%), Gaps = 48/1753 (3%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||||||| || || | ||| ||||||| ||||| | || || | Sbjct 3088 GTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGAC 3029 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAG---ATGTTGAGCGACTGGGACTGGTCG 78306 | ||||||| ||| | | || |||| || | ||||||| ||| || ||||| ||| Sbjct 3028 GTCAGCTTG-CCATAGTTTGG--CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCG 2972 Query 78307 ATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATG 78366 || |||| || || || || ||||| | |||| || || || |||||||| | Sbjct 2971 ATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACC 2912 Query 78367 GTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTA-CGCTCCCACC 78422 || ||| | | | | || | | | || || | | ||| | || ||| | Sbjct 2911 GTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGATCC-ATT 2853 Query 78423 GGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482 | || |||||| ||||| || | | | ||| || || || | |||| | Sbjct 2852 GTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTG 2793 Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542 | || || |||| | || ||||||||| | ||| || | ||| | ||| Sbjct 2792 CAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTT 2733 Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602 | ||||||||||||||| | || ||||| || | || || || || || || ||||| Sbjct 2732 CGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGG 2673 Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTA---- 78658 ||| || || | ||| || ||||| |||| || ||| | ||||| |||| | Sbjct 2672 CATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTC 2613 Query 78659 GGCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTC 78716 |||| || ||| | || ||| | | |||||| || || || || |||| Sbjct 2612 GGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAATGCCCTT 2553 Query 78717 GGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA 78776 | | |||| |||| | |||||||||| | || || ||| || || || Sbjct 2552 GCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTCACAGCT 2493 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | | ||| || ||| ||| | | ||||| || || || |||| | |||| Sbjct 2492 CGCTTCCAGTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTC 2433 Query 78837 GGTCTCGT-CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895 || | | || ||| | || | || ||||| ||||||||| |||||| ||||||| Sbjct 2432 T-TCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGA 2374 Query 78896 TAGCGATCGGTCGGTGGCGCATGTTG---CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952 | ||||||||| ||||||||| ||| | ||| ||| | ||| |||| | Sbjct 2373 TGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAA---T 2317 Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012 | ||| |||| |||||| || ||||| || | || || || | || || | Sbjct 2316 TGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTG 2257 Query 79013 CGAAATCAAAATGATTTCCTTTGATG---AAAGTCGGT--AGGCACAGCGATGCCAGGTT 79067 | || ||| | | ||| ||| | ||| | | |||| | ||| ||||| || Sbjct 2256 CAAAGTCATAC-GTTTTGTCTTGCTTTACAAACATGTTCAAGGCG-ATCGAGGCCAGATT 2199 Query 79068 GCACACGGCCGTCTCGTCCG--GGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125 ||| || || ||| ||| | | || | ||| | || || ||||||| || || Sbjct 2198 GCATACCGCTACCTCATCCTTCGACGAGTA--CTCCACAATCTCAGTGCACAGGTTGGAA 2141 Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185 | |||||||||||||| |||| |||||| || || || || || |||||||| | Sbjct 2140 CATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGC 2081 Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTGA-GAACGCCGTCC-CAGATGTCCCGGG 79243 |||||||| ||||| || ||||| | || || ||| || ||||| || | | Sbjct 2080 ATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGAT--CCTGCG 2023 Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303 || || | | | | ||||||| | ||||| | ||||| || | ||| Sbjct 2022 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACT 1963 Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363 | || || || || | || || || || |||||||||||||||||| ||| | Sbjct 1962 CTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTT 1903 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 ||| | ||| || || |||||| |||||||| ||||| || || || | ||| | Sbjct 1902 CGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCC 1843 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | || | |||||| | ||| ||| ||| |||||||| || | || ||| Sbjct 1842 GTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGC 1783 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 | ||||||||||| |||||||||||||| | || |||||| ||| ||||| | || Sbjct 1782 CATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTTGCCACCCTGATCGA 1723 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 ||||||| ||||| |||||| | || || ||||| ||||| | |||| | | |||| Sbjct 1722 CGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGT 1663 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 |||| ||| ||| || || |||| || || | ||| || | ||||||||| Sbjct 1662 TCGTACCGGAGATGTACGTTCCCTTCGCGCGGAT-ACAGTGCACGTTCAGTCCGATGCCA 1604 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 |||| | | || || || | || |||| ||| ||||| |||||||||||||| || Sbjct 1603 CCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTA 1544 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 || || ||| | | |||||||||| ||| | ||| || | |||| | || Sbjct 1543 TCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTAGCCGCAGCA 1484 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAG-AACTTTTGGCTCATCAGATCGTACGTCTCCTT 79841 || | ||| |||| ||||| |||||| ||| | || || ||||| ||| ||||| | Sbjct 1483 AACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGG-ACAGCAGATTGTAGGTCTCGAT 1425 Query 79842 GACGC-GC-GGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGG 79899 ||| || || ||| ||||| |||||||| | || |||||||| | | || |||| Sbjct 1424 --CGCTGCATCGATGTCCTCGCCATGGATGCCAATGGCAACGCGCATCAGCATGTGCTGG 1367 Query 79900 GGCGTCTCGCCGA 79912 || |||| ||| Sbjct 1366 GGGCGCTCGACGA 1354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548386098647760