Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8504 257 2e-63 seq8412 170 2e-37 seq2002 158 1e-33 seq7263 132 5e-26 seq6779 86.0 7e-12 >seq8504 Length=8995 Score = 257 bits (284), Expect = 2e-63 Identities = 1138/1759 (65%), Gaps = 82/1759 (5%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||||||||||||||| || || | ||| ||||||||||||| | || || || Sbjct 3088 GTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAATGGATCGAC 3029 Query 80098 CTGAGCTTCGCA-AGTGTGGGGTTCTCCATGAAG---ATGTTCAGAGACTGAGACTGACA 80153 | ||||| || ||| ||| |||| || | ||||| | || || |||||| Sbjct 3028 GTCAGCTTGCCATAGTTTGG----CTCCGCGACGTGAATGTTGAACGATTGCGACTGATC 2973 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTG--GA-ATTTCCCA 80210 ||| || || ||||||||||| ||||||| | || || ||| || || ||||| Sbjct 2972 GATAAACGCGCCACGATCTGCGGCCATTT---TGATGCACGTTTTCACCGAGATCTCCCA 2916 Query 80211 TACTGTACGATACACCTTACGAAGCTCCTCTGGAATGTCC---AGATTTTGCACACTGCC 80267 ||| || |||| | |||| |||| || || || | ||||| | || Sbjct 2915 TACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCTATCTTTTGGATCGATCC 2856 Query 80268 ACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCC-AGACACCAAGCTTGTGCAGAT 80326 | || | ||||| || |||| || || ||| | | ||| | ||| || || Sbjct 2855 ATTGTTGGACAGAATTTCGTTCTTCATGTC-GAGATCCCACAGACCCATGTTGGTCAAAT 2797 Query 80327 CTTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACA 80386 | | || ||| || | ||| | || ||||| |||| || ||| | || | Sbjct 2796 CCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAA 2737 Query 80387 GGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCG 80446 ||| | ||||| ||||| || | || ||||| ||||| || || |||||| |||| Sbjct 2736 CGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCG 2677 Query 80447 TCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA 80506 ||||||||||| | | || ||| ||||| || | ||||||||| ||| | || || Sbjct 2676 TCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCA 2617 Query 80507 AATCTGACCAAAAATCAACCCCAACGCTGTGACC-----CCACATGTCGTGCTGCAAGAT 80561 | || | ||| || || || | || |||||| |||| ||||| || Sbjct 2616 ACTCGGCCCAGT--TCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 2559 Query 80562 GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC 80621 ||||| | |||| ||| || ||||||||||||| || || ||||||||| Sbjct 2558 GCCCTTGCTCACCGGGCTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAGCTC 2499 Query 80622 ACA---CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACC 80678 ||| || |||| | || ||| || ||| || || | || || | Sbjct 2498 ACAGCTCGCTTCCA---GTGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTT 2442 Query 80679 GCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTG 80738 | |||| | | ||| ||| ||| ||||| |||||| | || |||| |||||| Sbjct 2441 TTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTG 2382 Query 80739 AACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTA 80798 ||||||||| ||||||| | ||||||| | || || |||| |||||||| | || || Sbjct 2381 CACGCCGATGCCGATCGGTCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATA 2322 Query 80799 AAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAG 80858 | || ||| |||| |||||| ||||| || || | | || || | || Sbjct 2321 GTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAG 2262 Query 80859 TTTCTGAAAGTCGAA---TTGGTTCCCCTTCACAAA--TGCCGGAAGGCTCAGGGACGCC 80913 || |||||| | || || ||| ||||| || ||||| | || ||| Sbjct 2261 CTTTGCAAAGTCATACGTTTTGTCTTGCTTTACAAACATGTTC-AAGGCG-ATCGAGGCC 2204 Query 80914 AGATTGCACACGGCCACCTCTTCAGCATCTGTAA--ACTCGACGATTTCCGTGCACAAAT 80971 |||||||| || || ||||| || | || | |||| || || || ||||||| | Sbjct 2203 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATCTCAGTGCACAGGT 2146 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGG-CG-TTGCAAGCGTCCTT 81029 | ||| | || || || || | || | |||||| |||| || |||||||| ||||| Sbjct 2145 TGGAACATTTGATGGTGCCGATATTCTGCTGGTT--ACTTTTACGATTGCAAGCATCCTT 2088 Query 81030 GTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTC 81089 ||| ||||||||| ||||| || ||||| || | || ||| || ||| | || Sbjct 2087 GTACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATC 2028 Query 81090 GCGCGCCTTGACCACCTTGCGGAATTTG-CCTTCGGCCACATACTTGGCGTA-AGCTTCG 81147 ||||||| ||| | || || | || || | | ||| | ||| |||||| Sbjct 2027 CTGCGCCTTCACCTGCC-GCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC- 1970 Query 81148 TCGAACT--TGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 ||||||| | || || | || || | || | || || |||| |||||||||||| Sbjct 1969 TCGAACTCTTCGCCCC---AGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGG 1913 Query 81205 TGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCG 81261 ||| | |||||| || ||| || |||||| ||| || |||||||| ||| Sbjct 1912 CTCCACA---TTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG 1856 Query 81262 GTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAG 81321 |||| ||| || ||| ||||||| | || ||| || |||||||| Sbjct 1855 TAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAAC 1796 Query 81322 TCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA----TC--GACCCCTTGCGA 81375 || | || || ||||||| ||||| ||||| | ||||| || | || |||| Sbjct 1795 TCGAATATATCGCCATGCCACGGCTCAAGATAGATGGCGAATGCTCCGGGCCGCTTGTT- 1737 Query 81376 CGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATA 81435 ||||||||| | |||||| || || || ||| | || |||| ||| || | | | Sbjct 1736 --GCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGA 1679 Query 81436 CCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGA 81493 || | || ||||||||||| ||| || ||||| ||||| | | ||| Sbjct 1678 CCGTTCGAAATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACG 1619 Query 81494 TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553 || | | ||||||||||| | | | || ||||| |||||||| | |||| || || | Sbjct 1618 TTCA--GTCCGATGCCACCGGCCGATTTCGAAATTAGAGCACACTGCTTCAGCGTGTCGT 1561 Query 81554 AAATTCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612 | || ||||| |||||||||| ||| ||||| || ||| ||| || | ||| || Sbjct 1560 AGATGCCCTCAATGCTATCTTCGGACATGGTCAA-CAGGAAGCAGGACGAAAGCTGGGGA 1502 Query 81613 CTTTTTG-AGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACAT 81671 | | | |||| ||| |||| ||||| | ||||| |||| ||||| | |||| Sbjct 1501 CGCTGCGTAGCC-GCAGCAAACATGGTTGGCGAGGCGTGGGTGAAGTAACGCTCGGACAG 1443 Query 81672 CAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730 ||| | ||||| || | | || | | || || || || || || || || || || | Sbjct 1442 CAGATTGTAGGTCTCGATCGCTGCATCG-ATGTCCTCGCCATGGATGCCAATGGCAACGC 1384 Query 81731 GCATAAACATGTACTGGGG 81749 |||| | ||||| |||||| Sbjct 1383 GCATCAGCATGTGCTGGGG 1365 >seq8412 Length=7683 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| ||||| |||||||| ||| | Sbjct 3786 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 3845 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || || ||||||||||||||||| || ||||| ||| Sbjct 3846 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 3905 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || || || | ||||| || Sbjct 3906 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 3965 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || |||| || |||||||| Sbjct 3966 ATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 4012 >seq2002 Length=20453 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || ||||||||||| || || |||||||| ||| | Sbjct 18452 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 18511 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || ||||||||||| || ||||| ||||| ||| Sbjct 18512 GACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 18571 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| ||| || || | ||||| || Sbjct 18572 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAC 18631 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| || |||| || || ||||| Sbjct 18632 ATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGG 18678 >seq7263 Length=8888 Score = 132 bits (146), Expect = 5e-26 Identities = 299/447 (67%), Gaps = 8/447 (2%) Strand=Plus/Minus Query 31962 GCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGC 32021 ||| |||||||| | || |||||| | ||||| |||||||||||| | ||| | Sbjct 5894 GCGCTCCATTCCGTGCATGCTGGACGGGTTGAAGCCGGGCCAGCGCAAGGTGCTGTACAC 5835 Query 32022 CTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGC 32081 ||| ||||| || | | || |||||||||| |||||| | || | ||||| Sbjct 5834 GTGCTTCAAGCGTGACGACAAGCGCGAGGTGAAGGTGGCCCAGCTGGCCGGTTCGGTGGC 5775 Query 32082 AGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGC 32141 || | | ||||| || ||||||||| ||||||| || || ||||||| || Sbjct 5774 GGAAAAGTCCGCCTACCATCACGGCGAGATGTCGCTCTGCTCGACGATCATCAACCTGGC 5715 Query 32142 TCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGAC 32201 ||||||| ||||| || ||| | || | || | || || ||||| || || Sbjct 5714 GCAGAACTACGTCGGCAGCAACAACATCAATCTGCTGTACCCGGGCGGTCAGTTCGGTAC 5655 Query 32202 CCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCG 32257 ||||| | ||||||||||| || ||| || | ||||||||||| | ||| || Sbjct 5654 GCGGCTGACGGGTGGCAAGGACAGCGCCAGCCCCAGGTACATCTTCACGATGCTGTC-CG 5596 Query 32258 CACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTG 32317 | | |||||| | || ||| | ||| |||||| || |||| ||||| | | | Sbjct 5595 CGC---TGACGCGGCACATCTTCCATCCGCTCGACGATCCGCTGCTGGAGTACCAGTACG 5539 Query 32318 ATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGA 32377 | ||| |||||| |||||||||| | || ||| | |||||||| | | | | Sbjct 5538 AGGACAATCAGCGCATCGAGCCGGTTTGGTATTTGCCGATCATTCCGATGCTGCTAATCA 5479 Query 32378 ACGGTGCAGAAGGCATCGGAACGGGGT 32404 |||| || || || ||||| || |||| Sbjct 5478 ACGGAGCGGACGGTATCGGCACCGGGT 5452 Score = 113 bits (124), Expect = 5e-20 Identities = 185/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236 || || || ||||| || | ||| || |||||||| || ||||| ||| ||||| Sbjct 6748 GGCTCAAAGAAGTCGAAGATCAAGGGCATCCCGAAGCTGGAGGACGCGAACGATGCCGGC 6689 Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296 | | ||| |||| | | |||||||| || | |||||||| |||||||| || |||| Sbjct 6688 TCGCGCAACTCGCTCAACTGCACGCTCATCCTCACCGAGGGAGACTCGGCCAAAACGCTC 6629 Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356 || | | || || | || || |||||| | ||| ||| ||||||||||| || || Sbjct 6628 GCCGTGTCCGGGCTGGGGGTGGTCGGGCGCGACACGTACGGCGTGTTTCCGCTGCGCGGT 6569 Query 31357 AAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCC 31416 |||| || || || || || || | || ||| | ||| |||| || || | Sbjct 6568 AAGCTGCTGAATGTGCGCGAGGCAACGCACAAGCAGATCCTGGAGAATGCGGAAATTAAC 6509 Query 31417 AACCTGAAAAAGATCCTCGGGCTTCAG 31443 ||||||| ||||||||||| || ||| Sbjct 6508 AACCTGATCAAGATCCTCGGCCTGCAG 6482 >seq6779 Length=15061 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 64774 ATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 || |||||||| || ||||| ||||||||||| || || | || ||||||||||||||| Sbjct 3122 ATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATC 3181 Query 64834 TCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865 || || ||||| ||||| ||| || ||||| Sbjct 3182 TCGCGCGACGAAGGGCTGCACTGCGACTTTGC 3213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570166189886480