Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4818 179 3e-40 seq2002 150 2e-31 seq8412 125 6e-24 >seq4818 Length=14046 Score = 179 bits (198), Expect = 3e-40 Identities = 227/312 (73%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 ||||||||| |||||||| |||| || | |||| | | || ||||| |||||| Sbjct 10251 ACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGCAC 10192 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || || |||||||||| ||||| |||||||| |||| ||| | | |||| | || Sbjct 10191 GGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGGAA 10132 Query 135581 GCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAAT 135640 ||||| | || || | | | || ||| ||||||| | ||||| |||||| | || Sbjct 10131 GCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGAAC 10072 Query 135641 GGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGC 135700 || ||||| ||||| |||||||| || || | |||||||| || |||||||||||| Sbjct 10071 GGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGGCTGGAAGGAGCGC 10012 Query 135701 AAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTA 135760 || | |||||||| ||||| || |||||||||||||| || | | ||||| || || Sbjct 10011 GAAATCTTTGGCAAAATTCGGTACATGAACTATGACGGATGCAAGCGTAAATTCAACGTG 9952 Query 135761 AATTTGTACGTG 135772 ||| || |||| Sbjct 9951 AATGCGTTCGTG 9940 >seq2002 Length=20453 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| || ||||||||| | || || ||||| || || || || Sbjct 18451 CATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTC 18510 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| |||| || || ||| || || ||||| |||||||| || || ||||| Sbjct 18511 GGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCA 18570 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| || |||| || || || | ||||| ||||| Sbjct 18571 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAA 18630 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| ||||| |||||| | ||| |||| |||| | || ||||| Sbjct 18631 CATTCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTCCGTGGTGG 18678 >seq8412 Length=7683 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | ||||| ||||| || || || || Sbjct 3786 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 3845 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| |||| || || || || || ||||| || || || || || ||||| Sbjct 3846 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 3905 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| || | || | ||||| |||||| Sbjct 3906 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 3965 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | ||| |||| |||| |||| ||||| Sbjct 3966 ATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 4012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434808425446080