Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2002 140 8e-28 >seq2002 Length=20453 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| ||| || || || || || ||||| || || | ||||| |||| | ||| Sbjct 18673 ACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGT 18614 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || || || || ||||| || Sbjct 18613 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCC 18554 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| ||||||||| ||||||| ||||| ||||| || | || || || | Sbjct 18553 TTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAG 18494 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | ||||| | ||| | ||||| || Sbjct 18493 TGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 18449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192222114918926