Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq19408 87.8 5e-13 seq14771 84.2 6e-12 >seq19408 Length=1197 Score = 87.8 bits (96), Expect = 5e-13 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 42496 AGCAGCAGCTCGCCGACCTGACTGAGCTTGAGCAGCGGCAGATTCCTTACGCGACAGCCA 42555 ||||| || ||| |||| || || || |||| ||||| |||| | ||| || || | Sbjct 458 AGCAGGCCCTGGCCAACCTCACCGATCTGGAGCGCCGGCAACTTCCGTTCGCCACTGC-A 516 Query 42556 CTG-CGCTTACGCGGACCGCGCAAGGCCTGATGGATC--GAT-TGCGCGATGAGATGCGT 42611 ||| | || || || || || |||| || ||| || || | || | |||||| | Sbjct 517 CTGGCACTGACTCGTACGGCCCAAG---TGGTGGCTCAGGACATCCGGGCCGAGATGTCT 573 Query 42612 GTCGTGTTCGACCGCCCGACCCCGTACACCCTGAACAGCCTGCGCATGGTGCCAGCCAGG 42671 | |||||||||||| || || ||| |||||| || ||| || ||| | ||| || | Sbjct 574 GCCGTGTTCGACCGGCCCACACCGGCCACCCTCAATAGCTTGTTCATCGAGCCGGCGACC 633 Query 42672 AAAGACCGGCTGGAAGCGCGGGTTTGGTTCAAGGACG 42708 || | ||||||||||||||| ||| ||||||||| Sbjct 634 AAGCAGAAGCTGGAAGCGCGGGTGTGGATCAAGGACG 670 >seq14771 Length=3193 Score = 84.2 bits (92), Expect = 6e-12 Identities = 124/174 (71%), Gaps = 5/174 (3%) Strand=Plus/Plus Query 11503 TGCGTTCTGGTGAGGCTTGGCCATCACCACGTCCTTGAATATCCATGGTCACTGTTCTTG 11562 |||| ||||| | ||||||| ||| |||| ||| || || ||| || ||| | Sbjct 2019 TGCGCCCTGGTCCGCATTGGCCACCACGACGTGCTTCGCTACCCGTGGAGCCTCTTCCTC 2078 Query 11563 ACCGCGCTGAAGGCTGAATGAAATG---GCTGACGTAAAGATCCGGCTGACCGCTGACCT 11619 | |||||||||||||||| ||||| |||| | || ||||||||| || || || Sbjct 2079 AACGCGCTGAAGGCTGAA--AAATGACAACTGAAATTGAGTTCCGGCTGAAGGCCGATCT 2136 Query 11620 CGATGATGCGCTGCGCGAGGTGTCAGGCTTCCGCAAGGAATATGCCGAACTGGT 11673 ||| |||| || ||||| |||||||||| ||||| ||||| || || || Sbjct 2137 CGACTCTGCGGTGAAAGAGGTTGCAGGCTTCCGTAAGGAGTATGCGGAGCTCGT 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138331562094222