Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq24 336 3e-87 >seq24 Length=2561919 Score = 336 bits (372), Expect = 3e-87 Identities = 1194/1852 (64%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || || || ||||| ||||||||||| || ||||| | || | |||| ||||| ||| Sbjct 1154672 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 1154613 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 || || || || ||| ||| | || || || | || || || | ||||| Sbjct 1154612 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1154553 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 1154552 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTAACCGAGATCTCC 1154493 Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATAGA 53064 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 1154492 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1154434 Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124 |||| | || ||| ||||| || || || ||| | | | ||| || Sbjct 1154433 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1154374 Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184 | | || ||||| | || || || || || || || ||||| || | || | |||| Sbjct 1154373 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTA 1154314 Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244 || || || ||||| || | || ||||| || || | |||||| || || || || Sbjct 1154313 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1154254 Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304 |||||||| || |||| || | ||| | || ||||| || ||| || || || Sbjct 1154253 CGTCGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTT 1154194 Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364 | |||| ||||| ||||||| |||| | || ||||| Sbjct 1154193 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 1154134 Query 53365 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 53423 || || || | | | ||| | || || ||||| || || || | || | | Sbjct 1154133 GCCCTTGCTCACCGGGCTGCCCT-CGTACGTCTCGTACGGGCCATCTCGAGCGGCCAACT 1154075 Query 53424 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 53483 |||| ||||| || | || ||||| || ||||||||||| || | || |||||| | || Sbjct 1154074 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1154015 Query 53484 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 53543 | || || ||| || | ||||| | || || ||||| || || | || || | Sbjct 1154014 GAGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCA 1153955 Query 53544 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 53603 | || || ||||| || || || | | |||| ||| | ||| || || | ||||| | Sbjct 1153954 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1153895 Query 53604 AATTAATATCTATAATTTTATTGAGGTTTCT-GACAATTACTTTGACCACATCCTTCAGT 53662 |||| | ||| || ||||| || || || | | | | ||| | | || |||||||| Sbjct 1153894 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGTCTTAG-CGACTTCCTTCAGC 1153836 Query 53663 TTGAGAAAATCAAATTGTCCATCTA---TTACAAACATGTTCAATGCAATAGATGCCAGA 53719 || ||| ||| | | |||| |||||||||||||||| || || || |||||| Sbjct 1153835 TTTGCAAAGTCATACGTTTTATCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGA 1153776 Query 53720 TTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATTAC 53777 || || || |||||||||| | || || || | | || |||||||| | || Sbjct 1153775 TTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATTTCAGTGCACAAGTTGG 1153718 Query 53778 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 53837 ||| |||||||| || | ||| || || ||||| || || || |||||||| || | Sbjct 1153717 AACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACA 1153658 Query 53838 GAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAG 53897 | ||| | || || ||||| | ||| ||||| || ||||| ||| | | | | Sbjct 1153657 GCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCG 1153598 Query 53898 CCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACT 53957 |||| | | | | ||| | ||||| || |||| || |||| Sbjct 1153597 CCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTCTCGAACT 1153538 Query 53958 CGTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCCGGACACATCAACGACCACT 54014 | || ||||| ||||| || || ||||| || | ||| ||||||| |||| Sbjct 1153537 CTTCGCCCCAGG---TGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCACA 1153481 Query 54015 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 54074 | ||| ||| ||| || ||||| || || || || ||||| || || |||| | || Sbjct 1153480 TTTCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCG-TAAA-ACAT 1153423 Query 54075 CTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 54132 || || | | ||||| || || || || || || |||||||| ||| | | || Sbjct 1153422 GTCCCGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATAT 1153363 Query 54133 ATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTG 54192 ||| |||||| || || | || |||| | |||||||||| ||||| || ||||| Sbjct 1153362 ATCGCCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTG 1153303 Query 54193 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 54252 ||| | ||| | || || || || || || | | ||| || | | ||| || || Sbjct 1153302 ATCGACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAAT 1153243 Query 54253 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCTA 54311 || || || |||||||| || |||| | || || ||| | | | | || || | Sbjct 1153242 CCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCGA 1153184 Query 54312 TCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 54371 | || || ||| || || |||| ||||| | || | || || ||||||||||| | Sbjct 1153183 TGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCAA 1153124 Query 54372 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431 | ||||| || |||| | | || |||||| || | ||| |||| || ||| Sbjct 1153123 TGCTATCTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCCG 1153064 Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 54491 | ||| | || || || ||||| ||||| | || || || |||||||| |||| Sbjct 1153063 CCGCAAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTCT 1153004 Query 54492 CGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 54551 |||| |||| || || ||| ||| || || | || || ||||| | |||||||| Sbjct 1153003 CGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCT 1152944 Query 54552 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAA 54611 | || | || ||||| || || || ||||||||||| ||| |||||| ||||||| Sbjct 1152943 GGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAA 1152884 Query 54612 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 | || |||||||| || ||||| || ||||||||||| | ||||| || Sbjct 1152883 AGCCGAAATAGTTATACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1152832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593706556578960