Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq272 105 8e-18 >seq272 Length=153155 Score = 105 bits (116), Expect = 8e-18 Identities = 232/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| || |||| ||||| ||||||| |||||||||||| ||||| |||||| Sbjct 12851 AGTCCGGTGACATGCGCGATCATGTGAGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGC 12792 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| || | ||| |||| || || |||| ||| || || ||||| || | Sbjct 12791 ACGCCCAGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTA 12732 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 ||| | ||||| || | |||||| || || || |||||| || | || | || Sbjct 12731 ACGAAAAACTGTGCCAAGCAGTGGCATGGTGGTAGCGCCATGTTAGGAATATCAGAGGGA 12672 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 ||||| ||| | || || | | | | ||| || |||| || | | |||| Sbjct 12671 TTCCAAGCGCACATGATGATTCGACGGTCGTAGGGATTGTTCTTAATTTTGTCGATCACT 12612 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGG-AGTCCACGTACGCGGC 146048 || ||||| || | ||||| || |||||| ||| ||| | ||| | ||| Sbjct 12611 TCAGCCAGCTGATCTATTCCCTGACCTGTGTAATC-GTCGTGGCATGTTTTGTAGGTGGC 12553 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 || ||||| | |||||| ||||| || || || |||| ||||| Sbjct 12552 ACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCAAATCCCC 12508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590061848929080