Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq118 100 5e-16 >seq118 Length=660226 Score = 100 bits (110), Expect = 5e-16 Identities = 195/280 (70%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 189435 AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGC 189494 |||| ||||| ||| |||||| || | || |||||||||||| || || || |||| Sbjct 48970 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 49029 Query 189495 ATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554 | | || | || ||||| ||||| || ||||| || || ||||| | ||| || || | Sbjct 49030 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 49089 Query 189555 ACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCT 189613 | || ||||| | |||||| ||||| | ||| || || || ||||| Sbjct 49090 AAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCG 49148 Query 189614 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGAT-TACACGAT-AGAGCGTGGAAAG 189671 ||||| ||||| ||||| |||||||| | | |||| | | |||||| || || ||||| | Sbjct 49149 AACGGGTACGTCGGTTGCATGTGGTCGA-TCGCGGGTATCCACGATCAGGGC-TGGAAGG 49206 Query 189672 AAAGACCGATATTTGGAAAGATAAGATATATGAATTATGA 189711 | | || ||||| || || | || ||||| ||||| Sbjct 49207 AGCGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGA 49246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923173408501080