Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq68 122 2e-22 >seq68 Length=1109118 Score = 122 bits (134), Expect = 2e-22 Identities = 265/394 (67%), Gaps = 16/394 (4%) Strand=Plus/Minus Query 253997 CGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCT 254056 ||| || || || |||| | |||| || ||||| || || || || || ||||| Sbjct 384745 CGATCTGCCGAATCTGCTGCTGTACGGACCACCCGGCACCGGTAAAACCAGCACAATCCT 384686 Query 254057 GGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 |||| ||| || ||||| ||||| | || | |||||| | ||||||||||| Sbjct 384685 GGCGGCGGCGAGACAGCTGTTCGGCGACATGTTCAAG---GAGCGCATTCTCGAGCTGAA 384629 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT 254176 || || ||||| || || | | || | ||| ||||| | || || ||| || || | Sbjct 384628 TGCGTCGGACGACCGTGGCATTGCGGTTATTCGCAACAAGGTGAAAACGTTCGCCCAGCT 384569 Query 254177 GTCGAT------TTCGT---CGTTCC--AACCCGGCTGTCCGCCTTTCAAGCTCGTGATC 254225 | || | || || | || || |||||| || ||||| |||| ||| Sbjct 384568 GACGGCGAGCGGTACGCGGACGGACGGTAAGCC--CTGTCCACCGTTCAAAATCGTCATC 384511 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 ||||| ||||| ||| | |||||| | |||||| ||||||| ||||| ||||||||| Sbjct 384510 CTGGATGAGGCCGACGCGATGACGCATGCAGCGCAGGCCGCCCTGCGCCGCACGATGGAG 384451 Query 254286 ACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCC 254345 | | | | ||| || || || || |||||||||||||||||| || |||| Sbjct 384450 AAGGAAACGAAAACGACACGGTTCTGTCTAGTGTGCAACTACGTGTCGCGCATTATCGAA 384391 Query 254346 CCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| | | || || || |||||||||| |||| Sbjct 384390 CCGATCACATCGCGCTGTACCAAGTTTCGCTTCA 384357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073738513279936