Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24 389 6e-103 seq3 113 6e-20 >seq24 Length=2561919 Score = 389 bits (430), Expect = 6e-103 Identities = 1210/1853 (65%), Gaps = 30/1853 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || ||||| ||||||||||| || ||||| | || | |||| ||||||||| Sbjct 1154672 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCGTAGAAA 1154613 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1154612 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1154553 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 1154552 TGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTAACCGAGATCTCC 1154493 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 78974 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 1154492 CATACCGTTTTGTACAGGTCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1154434 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 1154433 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1154374 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | || ||||| | || || || || || || || ||||| || | || | |||| Sbjct 1154373 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACGCGCCTATTGTA 1154314 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 || || || || || || | ||||||||| || || | |||||| || || || || Sbjct 1154313 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1154254 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 ||| ||||| || |||| || | ||| | || ||||| | ||| || || || Sbjct 1154253 CGTCGGCATTGGGGCCAACAGCAGCGAATTGCGAATACCGTGCTTTGCGATCTTTTCCTT 1154194 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 | |||| | ||| ||||| | ||| | ||||| | || || || ||||| Sbjct 1154193 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAGAAT 1154134 Query 79275 ACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333 || || || | || ||| ||| || || || || || || |||| || | Sbjct 1154133 GCCCTTGCTCACCGGGCTGCCCTC-GTACGTCTCGTACGGGCCATCTCGAGCGGCCAACT 1154075 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 |||| ||||| || | || ||||| || ||||||||||| || | || ||| || | || Sbjct 1154074 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1154015 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || ||| ||| || | ||||| | || || ||||| || || | || || | Sbjct 1154014 GAGCCTCTTCGCTTTCGTACGGATAGCGCATTAGGATGAACGCATCGGCCATGCCCTGCA 1153955 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || ||||| || || || | | |||| || | ||| || || | ||||| | Sbjct 1153954 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1153895 Query 79514 AATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| || ||||| | | ||| | ||| | | || ||||| | Sbjct 1153894 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACTGT--CTTAG-CGACTTCCTTCA 1153838 Query 79571 GTTTGAGAAAATCAAATCGTCCATCTA---TTACAAACATGTTCAACGCGACAGATGCCA 79627 | || ||| ||| | | |||| |||||||||||||||| |||| || |||| Sbjct 1153837 GCTTTGCAAAGTCATACGTTTTATCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCA 1153778 Query 79628 GATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAGGTT 79685 |||| || || |||||||||| | || || || | | ||||||||||| | ||| Sbjct 1153777 GATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCCACAATTTCAGTGCACAAGTT 1153720 Query 79686 ACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 79745 ||| || ||||| || | ||| || || ||||| || || || |||||||| || Sbjct 1153719 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 1153660 Query 79746 AAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 79805 || ||| |||| || ||||| | ||| ||||| || ||||| ||| | | | Sbjct 1153659 CAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTG 1153600 Query 79806 AGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTCG 79863 ||||| | | | | | ||| | ||||| | ||||| | || ||| Sbjct 1153599 CGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACTCCGTGTACAGCTTC--TCG 1153542 Query 79864 AACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCAC 79923 ||||| || ||||| || || || ||||| |||| || ||||||| |||| Sbjct 1153541 AACTCTTCGCCCCAGGTGTCCGATAGACCGGGACAATCGTGCGGGCACATCAGGCTCCAC 1153482 Query 79924 TCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 79983 | | | ||| || || ||||| || || || || ||||| || || |||| | | Sbjct 1153481 ATTTCGTTCGCCTCCACACGCTTCATGAACAGGTCCGGTATCCACAGTGCG-TAAA-ACA 1153424 Query 79984 TCTCTGGTTCTATG--CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 80041 | || || | | |||||| || || || || || || |||||||| ||| | | | Sbjct 1153423 TGTCCCGTGCGCGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCGAATA 1153364 Query 80042 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCT 80101 |||| |||||| || || | || ||||| | |||| || || ||||| || |||| Sbjct 1153363 TATCGCCATGCCAGGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCT 1153304 Query 80102 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 80161 |||| | ||| | || || || || || || | | ||| || | | ||| || || Sbjct 1153303 GATCGACGTACCGTGCCGTATTGTTGTAGACGCGTAGCATCGGCACCAGACCGTTTGAAA 1153244 Query 80162 TACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCT 80220 | || || || |||||||| || |||| | || || ||| | | | | || || Sbjct 1153243 TCCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCCG 1153185 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || ||| || || |||| ||||| | || | || || ||||||||||| Sbjct 1153184 ATGCCACCGGCCGACTTTGAAATTAGGGCGCACTGCTTCAGTGTGTCGTAGATGCCCTCA 1153125 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 |||||||| || |||| | | || |||||| || | ||| |||| || || Sbjct 1153124 ATGCTATCTTCGGACATGGTCAACAGGAAACAGGACGAAAGCTGGGGACGCTGCGTAGCC 1153065 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 || ||| | || || || ||||| ||||| | || ||||| |||||||| ||| Sbjct 1153064 GCCGCAAACATAGTTGGCGAGGCGTGGGTAAAATAACGCTCGGACAGCAGATTGTAGGTC 1153005 Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 || || |||| || || ||| ||| || || | || || ||||| | ||||||| Sbjct 1153004 TCGATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGC 1152945 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || || | || ||||| || || || |||| |||||| ||| |||||| |||||| Sbjct 1152944 TGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTA 1152885 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || |||||||| || ||||| || ||||||||||| ||||||| || Sbjct 1152884 AAGCCGAAATAGTTATACCCGAAGTCGCGATCGTAAATAATGGCCGAGTTCAG 1152832 >seq3 Length=6534354 Score = 113 bits (124), Expect = 6e-20 Identities = 182/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 4991094 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 4991153 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || |||||||| ||||| ||||||||||| || ||||| || || | || || Sbjct 4991154 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 4991213 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 || |||||||| || || || || || || || || | | ||| ||| | |||| Sbjct 4991214 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 4991272 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | ||||| || |||||| | || || || |||| || Sbjct 4991273 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCTCTTCACGCACGGCAGCG 4991331 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| |||||||| || || Sbjct 4991332 TTTCGATGGCATTGAACAG 4991350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718250600864280