Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq118 125 2e-23 >seq118 Length=660226 Score = 125 bits (138), Expect = 2e-23 Identities = 227/327 (69%), Gaps = 4/327 (1%) Strand=Plus/Plus Query 238561 AGCTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAA 238620 |||| |||| ||| |||| || || || ||||| || |||||| | || ||||| | Sbjct 48955 AGCTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGA 49014 Query 238621 GACTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGA 238680 ||||| ||||| | ||| | || ||||| ||||| |||||||| || || |||| Sbjct 49015 AGGAGGGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGA 49074 Query 238681 CTAGATCTCCAAAGGAAGCTCTTAGATATAGT-ATTTATCTGAACGATAAATACGAACTC 238739 | | | | || ||||||| ||| || | | || |||||||||||| ||| || Sbjct 49075 CGAAAACGCCCGAGGAAGCGCTT-GAGACGGCGATCTATCTGAACGATCGCTACAGTCTG 49133 Query 238740 GACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGAT 238799 || || ||||| ||||| ||||| ||||| |||||||| || || | |||||| Sbjct 49134 GATGGGCGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGTATCCACGAT 49193 Query 238800 -AGGGCATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGGAAC 238858 ||||| ||| ||| | || ||||| ||| || | |||||||| ||||| ||| Sbjct 49194 CAGGGC-TGGAAGGAGCGCGAAATCTTTGGCAAAATTCGGTACATGAACTATGACGGATG 49252 Query 238859 TAAGAAAAAATTTGATGTAAATGCTTT 238885 ||| ||||| | || ||||| || Sbjct 49253 CAAGCGTAAATTCAACGTGAATGCGTT 49279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151368497104116