Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq24 116 3e-21 >seq24 Length=2561919 Score = 116 bits (128), Expect = 3e-21 Identities = 135/179 (75%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTT-TCCGAA 5379 ||||| || | ||| || || | || || |||||||| ||||||| |||| || ||| Sbjct 2173639 TCGCAAATAAACTGTGCGATGCGATCACCTTTCTTAACTTCAAAGT---TGTTCTCAGAA 2173695 Query 5380 G--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCC 5437 || ||||| || || ||||| ||||| |||||||| ||||||| || || |||||| Sbjct 2173696 TGATTGAACAGTACTACTCCGACGTTGCCCCGGTAGTCCTCGTCGACGACACCGGCGCCC 2173755 Query 5438 ACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 || ||||| |||| ||| || || | ||||||||||| || | || || |||||||| Sbjct 2173756 ACATCGATGAAGTTTTTCACGGCCAAACCGGAACGTGGAGCCACCCGGCCATAGCAACC 2173814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447739055124240