Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq483 93.3 5e-14 >seq483 Length=55018 Score = 93.3 bits (102), Expect = 5e-14 Identities = 190/276 (69%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | |||||| | |||||| | ||||| |||||| | || || Sbjct 34435 ATTGGGATTTTGGAAGAATGGGCATTGGTGGATTGGATCGTGAATTTAATGCGATATTTC 34376 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAA 164511 |||| || |||||||| | | |||| | | || | | || || | || |||||| Sbjct 34375 GACGTGCTTTTGCTTCACG-TGTTTTCCCACCAGAGGTGGTTGAACAACTGGGTTGTAAA 34317 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 || |||| || ||| | || |||||||||||||| || |||||| | ||||| ||| Sbjct 34316 CACGTAAAGGGCATTCTTCTATATGGACCTCCTGGTACTGGCAAAACACTTATGGCACGA 34257 Query 164572 TGCATT-GCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATT 164627 ||| | ||| | ||||| ||| || || || || || ||||| || | | Sbjct 34256 CAAATTGGAACAA--TGTTAAATGCTCGAGAACC--AAAGATAGTAAATGGCCCGCAGAT 34201 Query 164628 ATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663 || | |||||||| ||||| || ||||||||||| Sbjct 34200 TTTAGATAAATATGTCGGTGAATCTGAAGCTAATGT 34165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595856902093200