Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq23 221 2e-53 seq95 179 6e-41 >seq23 Length=2586247 Score = 221 bits (244), Expect = 2e-53 Identities = 209/267 (78%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| |||||| ||||||||||| || ||||||||||| || ||| Sbjct 7279 GCGAAGCGTCATCGCAAGGTTCTTCGTGATAACATCCAGGGCATCACCAAGCCGGCCATC 7338 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||| ||||| ||||| |||||| |||| || ||| |||| || |||| Sbjct 7339 CGTCGTCTGGCTCGCCGTGGCGGAGTGAAGCGTATCTCCGGCTTGATCTACGAGGAGACG 7398 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| | ||||| ||| ||| |||| |||||| | || |||||| Sbjct 7399 CGTGGCGTTCTGAAGGTGTTCCTGGAGAACGTGATCCGTGATGCCGTGACGTACACCGAG 7458 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || |||||||| |||||| | |||||| | ||||| || |||| ||||| ||| Sbjct 7459 CACGCCAAGCGTAAGACCGTCACCGCTATGGATGTTGTCTACGCGCTGAAGCGTCAGGGC 7518 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| ||| ||||| Sbjct 7519 CGCACACTGTACGGTTTCGGAGGTTAA 7545 >seq95 Length=832630 Score = 179 bits (198), Expect = 6e-41 Identities = 200/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| || || ||||||||||| || ||||||||||| || ||| Sbjct 188503 GCCAAGCGTCATCGCAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATC 188562 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||||||||| ||||| || || ||||| |||| || || |||| || |||| Sbjct 188563 CGCCGTCTGGCTCGCCGTGGCGGCGTGAAGCGCATCTCCGGCCTGATCTACGAGGAGACG 188622 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| ||||| | ||||| ||| ||| |||| ||||| || ||| |||||| Sbjct 188623 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCACCTACACCGAG 188682 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| | |||||| | || || || |||| || || ||| Sbjct 188683 CACGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 188742 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || || || ||| ||||| Sbjct 188743 CGTACGCTCTACGGATTCGGAGGTTAA 188769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073346699711